Specifying evidence channels in STRINGdb
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@d843e988
Last seen 13 months ago
United States

Is there syntax for specifying which evidence channels to use in a STRING query for Bioconductor in R (e.g. Neighborhood, Database, Experiments)? I know there is a way to specify a physical subnetwork only, but here I need to control the individual evidence channel options (e.g. do not use edges/interactions based on the Textmining evidence channel). Would appreciate any guidance!

STRINGdb stringdb • 479 views
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Also I found prior thread here addressing the same question with response that functionality will be supported someday. This was a few years back.
Anybody know if it is supported yet or not? STRINGdb : accessing all types of (sub-)scores from interactions

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