Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
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Ali Osman • 0
@d3b64c92
Last seen 20 days ago
Germany

Hi,

As the name implies, longestConsecutive() finds the longest match of a character efficiently in Biostrings. I dont know any other alternative as fast as longestConsecutive() but it has been depreceated in version 2.72 (Bioconductor version 3.19). I wonder why it has been depreceated and not replaced? Is there any better alternative?

Thanks in advance!

Biostrings • 1.1k views
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@herve-pages-1542
Last seen 1 day ago
Seattle, WA, United States

I had no idea someone was using this, sorry.

Un-deprecated in Biostrings 2.72.1 (BioC 3.19) and 2.73.1 (BioC 3.20). The new versions will take a few days to propagate and to become available via BiocManager::install().

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