Question

Build error on kunpeng2 Linux aarch64

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Hongxiang • 0

@ac97bac2

Last seen 10 hours ago

United States

I'm having this issue when building my package under the kunpeng2 system, the error message is below. What should i do to fix this problem?

Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/curl/libs/curl.so': /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/curl/libs/curl.so: undefined symbol: curl_url_strerror

Bioconductor • 138 views

ADD COMMENT • link updated 18 hours ago by martin.grigorov ▴ 10 • written 1 day ago by Hongxiang • 0

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Hi,

There was a problem with icu and because of that the (r)curl library was not installed. The system/OS curl library is one version older than the one that intruduces curl_url_strerror. The problems have been solved by installing a newer version of icu. The next build report should be OK!

Martin

ADD REPLY • link 18 hours ago martin.grigorov ▴ 10

score 0 · Answer 1 · 2024-12-16

This isn't the place for developer questions. Please use the developer listserv at bioc-devel@r-project.org instead.

Also, you might want to mention what package you are talking about. You also might consider filtering the build report by error and looking to see if lots of other packages are having build errors on kunpeng2 (they are), and if so you can assume it's a server issue, not a package issue.