Deleted:Seeking Advice on HTA 2.0 Microarray Data Processing with Oligo Package
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Yao Lipu • 0
@19873cbb
Last seen 10 months ago
United States

Dear Bioconductor Community,

I am currently working with HTA 2.0 microarray data and using the oligo package for RMA normalization. I have encountered a few questions and would appreciate any guidance.The platform I use is GPL17586.

(1) After performing RMA normalization with oligo::rma(), I noticed that the extracted matrix contains multiple types of probe IDs. I would like to conduct differential expression analysis using gene symbols. Is it appropriate to directly convert the probe IDs to gene symbols, or is there a risk of introducing errors in the process?

hta20transcriptcluster.db HTA2.0 MicroRNAArrayData hta20probeset.db • 81 views
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