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Question: Genomicfeatures- Error: Image not found, dynamic loading, reputed error???
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gravatar for anupamsingh194
17 months ago by
anupamsingh1940 wrote:

Hi,

I am getting the following error while installing GenomicFeatures, and am wondering if this is a reported error?  

Error: package or namespace load failed for ‘GenomicFeatures’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/Library/Frameworks/R.framework/Versions/3.4/Resources/library/rtracklayer/libs/rtracklayer.so':
  dlopen(/Library/Frameworks/R.framework/Versions/3.4/Resources/library/rtracklayer/libs/rtracklayer.so, 6): Library not loaded: /usr/local/opt/openssl/lib/libssl.1.0.0.dylib
  Referenced from: /Library/Frameworks/R.framework/Versions/3.4/Resources/library/rtracklayer/libs/rtracklayer.so
  Reason: image not found

sessionInfo()
R version 3.4.0 (2017-04-21)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Sierra 10.12.4

Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats4    parallel  stats     graphics  grDevices utils     datasets 
[8] methods   base     

other attached packages:
[1] AnnotationDbi_1.38.0 Biobase_2.36.2       GenomicRanges_1.28.2
[4] GenomeInfoDb_1.12.0  IRanges_2.10.1       S4Vectors_0.14.1    
[7] BiocGenerics_0.22.0 

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.10               XVector_0.16.0            
 [3] GenomicAlignments_1.12.1   zlibbioc_1.22.0           
 [5] BiocParallel_1.10.1        lattice_0.20-35           
 [7] tools_3.4.0                grid_3.4.0                
 [9] SummarizedExperiment_1.6.1 DBI_0.6-1                 
[11] matrixStats_0.52.2         digest_0.6.12             
[13] Matrix_1.2-10              GenomeInfoDbData_0.99.0   
[15] bitops_1.0-6               RCurl_1.95-4.8            
[17] biomaRt_2.32.0             memoise_1.1.0             
[19] RSQLite_1.1-2              DelayedArray_0.2.2        
[21] compiler_3.4.0             BiocInstaller_1.26.0      
[23] Biostrings_2.44.0          Rsamtools_1.28.0          
[25] XML_3.98-1.7      

ADD COMMENTlink modified 17 months ago by Michael Lawrence10k • written 17 months ago by anupamsingh1940
0
gravatar for Michael Lawrence
17 months ago by
United States
Michael Lawrence10k wrote:

Right now you'll need to install rtracklayer from source, or install openssl from homebrew. We're working on getting the binary to work out of the box.

ADD COMMENTlink written 17 months ago by Michael Lawrence10k
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