Question: Genomicfeatures- Error: Image not found, dynamic loading, reputed error???
gravatar for anupamsingh194
11 months ago by
anupamsingh1940 wrote:


I am getting the following error while installing GenomicFeatures, and am wondering if this is a reported error?  

Error: package or namespace load failed for ‘GenomicFeatures’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/Library/Frameworks/R.framework/Versions/3.4/Resources/library/rtracklayer/libs/':
  dlopen(/Library/Frameworks/R.framework/Versions/3.4/Resources/library/rtracklayer/libs/, 6): Library not loaded: /usr/local/opt/openssl/lib/libssl.1.0.0.dylib
  Referenced from: /Library/Frameworks/R.framework/Versions/3.4/Resources/library/rtracklayer/libs/
  Reason: image not found

R version 3.4.0 (2017-04-21)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Sierra 10.12.4

Matrix products: default
BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.4/Resources/lib/libRlapack.dylib

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats4    parallel  stats     graphics  grDevices utils     datasets 
[8] methods   base     

other attached packages:
[1] AnnotationDbi_1.38.0 Biobase_2.36.2       GenomicRanges_1.28.2
[4] GenomeInfoDb_1.12.0  IRanges_2.10.1       S4Vectors_0.14.1    
[7] BiocGenerics_0.22.0 

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.10               XVector_0.16.0            
 [3] GenomicAlignments_1.12.1   zlibbioc_1.22.0           
 [5] BiocParallel_1.10.1        lattice_0.20-35           
 [7] tools_3.4.0                grid_3.4.0                
 [9] SummarizedExperiment_1.6.1 DBI_0.6-1                 
[11] matrixStats_0.52.2         digest_0.6.12             
[13] Matrix_1.2-10              GenomeInfoDbData_0.99.0   
[15] bitops_1.0-6               RCurl_1.95-4.8            
[17] biomaRt_2.32.0             memoise_1.1.0             
[19] RSQLite_1.1-2              DelayedArray_0.2.2        
[21] compiler_3.4.0             BiocInstaller_1.26.0      
[23] Biostrings_2.44.0          Rsamtools_1.28.0          
[25] XML_3.98-1.7      

ADD COMMENTlink modified 11 months ago by Michael Lawrence10.0k • written 11 months ago by anupamsingh1940
gravatar for Michael Lawrence
11 months ago by
Michael Lawrence10.0k
United States
Michael Lawrence10.0k wrote:

Right now you'll need to install rtracklayer from source, or install openssl from homebrew. We're working on getting the binary to work out of the box.

ADD COMMENTlink written 11 months ago by Michael Lawrence10.0k
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