Question: PCR bottleneck coefficient (PBC)
0
gravatar for C T
22 months ago by
C T90
United States
C T90 wrote:

Is there a way to calculate the PBC1 and PBC2 following ENCODE standard https://www.encodeproject.org/data-standards/terms/#library?

I thought ChIPQC calculate these but I cannot find it?

chipqc • 778 views
ADD COMMENTlink modified 22 months ago by Rory Stark2.8k • written 22 months ago by C T90
Answer: PCR bottleneck coefficient (PBC)
0
gravatar for Rory Stark
22 months ago by
Rory Stark2.8k
CRUK, Cambridge, UK
Rory Stark2.8k wrote:

No, ChIPQC does not compute these metrics. It does compute FRiP (fraction of reads in peaks) and duplication rate (fraction of reads that map to the same location as another read)..

-Rory

ADD COMMENTlink written 22 months ago by Rory Stark2.8k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 122 users visited in the last hour