PFAM enrichment analysis using Fishers.test
1
0
Entering edit mode
c • 0
@c-13614
Last seen 5.2 years ago

I would like to do pfam enrichment analysis using Fishers.test function in R. I have ~2500 Pfam domains and want to compare counts across 10 taxa, and want to calculate pvalues of each Pfam domain. The error is that "out of workspace", how do I increase the workspace? 

 

 

 

 

pfam • 1.2k views
ADD COMMENT
0
Entering edit mode
@james-w-macdonald-5106
Last seen 15 minutes ago
United States

I am not sure there is an error that says you are out of workspace. Anyway, your question has nothing to do with Bioconductor packages, so perhaps you should ask on R-help (r-help@r-project.org). If you do so, make sure to include your code and the actual error message.

ADD COMMENT

Login before adding your answer.

Traffic: 598 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6