Entering edit mode
Today I tried to retrieve results for a query using the queryDGIdb
function that yielded results just fine a few months back. The function is returning only empty data frames now. In fact not even the tutorial example will currently yield results:
> library(rDGIdb)
> genes <- c("TNF", "AP1", "AP2", "XYZA")
> result <- queryDGIdb(genes)
> resultSummary(result)
Object of class "data.frame"
data frame with 0 columns and 0 rows
> sessionInfo( )
R version 4.0.3 (2020-10-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19041)
Matrix products: default
locale:
[1] LC_COLLATE=Spanish_Mexico.1252 LC_CTYPE=Spanish_Mexico.1252
[3] LC_MONETARY=Spanish_Mexico.1252 LC_NUMERIC=C
[5] LC_TIME=Spanish_Mexico.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] rDGIdb_1.14.0
loaded via a namespace (and not attached):
[1] httr_1.4.2 BiocManager_1.30.10 compiler_4.0.3
[4] R6_2.4.1 tools_4.0.3 curl_4.3
[7] jsonlite_1.6.1
I tried all 3 archived versions of the package and running older R versions with no luck.