Using IlluminaHumanMethylation450kanno.ilmn12.hg19 and froze at installation.
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whirlsyu • 0
@whirlsyu-22601
Last seen 3.0 years ago
China

Recently, I found that under R 4.0.3 I can not install the package IlluminaHumanMethylation450kanno.ilmn12.hg19, It froze at the testing message. I tried this on 3.6.3, It will successfully be installed. However, It will be failed if you are using R 4.0.2+ I just use one line for installing. And I also tested on macOS and Ubuntu, which is OK.

But I just can not install it on windows 10. I tried several computers with win10 and R 4.0+(4.0.2 or 4.0.3), they all don't work. I tried to reinstall R totally and failed to install the package. Could you please tell me how to deal with the problem? Here is the code

>BiocManager::install("IlluminaHumanMethylation450kanno.ilmn12.hg19")

Bioconductor version 3.12 (BiocManager 1.30.10), R 4.0.3 (2020-10-10)
Installing package(s) 'IlluminaHumanMethylation450kanno.ilmn12.hg19'
installing the source package ‘IlluminaHumanMethylation450kanno.ilmn12.hg19’

trying URL 'https://bioconductor.org/packages/3.12/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0.tar.gz'
Content type 'application/x-gzip' length 57839020 bytes (55.2 MB)
downloaded 55.2 MB

* installing *source* package 'IlluminaHumanMethylation450kanno.ilmn12.hg19' ...
** using staged installation
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
  converting help for package 'IlluminaHumanMethylation450kanno.ilmn12.hg19'
    finding HTML links ... done
    IlluminaHumanMethylation450kanno.ilmn12.hg19
                                            html  
    SNPs.CommonSingle                       html  
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
##############stuck here##########################


>sessionInfo( )


R version 4.0.3 (2020-10-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19041)

Matrix products: default   

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base    

loaded via a namespace (and not attached):
[1] compiler_4.0.3 tools_4.0.3
IlluminaHumanMethylation450kanno.ilmn12.hg19 • 1.1k views
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