Using IlluminaHumanMethylation450kanno.ilmn12.hg19 and froze at installation.
0
0
Entering edit mode
whirlsyu • 0
@whirlsyu-22601
Last seen 9 months ago
China

Recently, I found that under R 4.0.3 I can not install the package IlluminaHumanMethylation450kanno.ilmn12.hg19, It froze at the testing message. I tried this on 3.6.3, It will successfully be installed. However, It will be failed if you are using R 4.0.2+ I just use one line for installing. And I also tested on macOS and Ubuntu, which is OK.

But I just can not install it on windows 10. I tried several computers with win10 and R 4.0+(4.0.2 or 4.0.3), they all don't work. I tried to reinstall R totally and failed to install the package. Could you please tell me how to deal with the problem? Here is the code

>BiocManager::install("IlluminaHumanMethylation450kanno.ilmn12.hg19")

Bioconductor version 3.12 (BiocManager 1.30.10), R 4.0.3 (2020-10-10)
Installing package(s) 'IlluminaHumanMethylation450kanno.ilmn12.hg19'
installing the source package ‘IlluminaHumanMethylation450kanno.ilmn12.hg19’

trying URL 'https://bioconductor.org/packages/3.12/data/annotation/src/contrib/IlluminaHumanMethylation450kanno.ilmn12.hg19_0.6.0.tar.gz'
Content type 'application/x-gzip' length 57839020 bytes (55.2 MB)
downloaded 55.2 MB

* installing *source* package 'IlluminaHumanMethylation450kanno.ilmn12.hg19' ...
** using staged installation
** data
*** moving datasets to lazyload DB
** inst
** help
*** installing help indices
  converting help for package 'IlluminaHumanMethylation450kanno.ilmn12.hg19'
    finding HTML links ... done
    IlluminaHumanMethylation450kanno.ilmn12.hg19
                                            html  
    SNPs.CommonSingle                       html  
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
##############stuck here##########################


>sessionInfo( )


R version 4.0.3 (2020-10-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19041)

Matrix products: default   

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base    

loaded via a namespace (and not attached):
[1] compiler_4.0.3 tools_4.0.3
IlluminaHumanMethylation450kanno.ilmn12.hg19 • 361 views
ADD COMMENT

Login before adding your answer.

Traffic: 201 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6