User: YaGalbi

gravatar for YaGalbi
YaGalbi20
Reputation:
20
Status:
New User
Location:
MRC Harwell Institute, Oxford, UK
Website:
https://github.com/roo...
Last seen:
20 hours ago
Joined:
1 year, 7 months ago
Email:
r**********@gmail.com

Microbiology BSc Hons 2016

Bioinformatics MSc Distinction 2017

Bioinformatics Prize 2017

Posts by YaGalbi

<prev • 19 results • page 1 of 2 • next >
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Comment: C: Size limit of external data
... Thanks Aaron. ...
written 17 days ago by YaGalbi20
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Size limit of external data
... Hi all, I'm sure I have actually seen the answer to this in the guidelines but I cannot find it again. I'm creating an R package with EXTERNAL data for examples. I have 5 .rda files compressed with xz, each is approx. 2.2Mb, so around 11Mb in total. I need to know the file size limit of: 1) indivi ...
package development size limit external data written 18 days ago by YaGalbi20 • updated 17 days ago by Aaron Lun19k
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Comment: C: Upregulation and Downregulation of Gene Ontology terms
... I think biostars is more suitable for this question ...
written 5 weeks ago by YaGalbi20
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Comment: C: Upregulation and Downregulation of Gene Ontology terms
... it would be better to show us where it says that. It is not possible to "up-regulate" an ontology term. I think you have mis-read. ...
written 5 weeks ago by YaGalbi20
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Comment: C: Tissue Specificity R-package
... Oh wow thank you Jaro...I'll go through this tomorrow...but just some thoughts on what I'm considering doing:   1) The basic function of the package would be to take count data and simply calculate specificity from that. For anyone that can load a package in R its a fast algorithm that takes about ...
written 8 weeks ago by YaGalbi20
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Comment: C: Tissue Specificity R-package
... As you clearly have some experience with CellNet - does it have clear advantages or disadvantages? ...
written 8 weeks ago by YaGalbi20
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Comment: C: Tissue Specificity R-package
... thank you for that Jaro - I'll be looking into it. ...
written 8 weeks ago by YaGalbi20
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Tissue Specificity R-package
... Hello everyone, I have written a pipeline that takes count data and calculates tissue specificity. I am planning to make an R-package from this and go for publication. Before I begin packaging and writing drafts, I am doing my literature review and also looking to see if someone has created a packa ...
R package package development tissue specificity written 8 weeks ago by YaGalbi20 • updated 8 weeks ago by jaro.slamecka100
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Comment: C: Can't install ChIPpeakanno - "libmysqlclient was not found" - do I need to remov
... You legend .. That worked! :)  Any chance of a job? ;) haha  ...
written 9 weeks ago by YaGalbi20
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Can't install ChIPpeakanno - "libmysqlclient was not found" - do I need to remove latest version of R?
... Hi all,   I had ChIPpeakanno installed and working on the last versions of R and Rstudio. I recently updated to the latest version or R and Rstudio. Just now I tried to run ChIPpeakAnno and it was not installed. I tried installing with  source("https://bioconductor.org/biocLite.R") biocLite("Ch ...
chippeakanno written 9 weeks ago by YaGalbi20 • updated 9 weeks ago by Mike Smith2.6k

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