User: YaGalbi

gravatar for YaGalbi
YaGalbi20
Reputation:
20
Status:
New User
Location:
MRC Harwell Institute, Oxford, UK
Website:
https://github.com/roo...
Last seen:
1 month, 3 weeks ago
Joined:
3 years, 2 months ago
Email:
r**********@gmail.com

Microbiology BSc Hons 2016

Bioinformatics MSc Distinction 2017

Bioinformatics Prize 2017

Posts by YaGalbi

<prev • 19 results • page 1 of 2 • next >
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Comment: C: Size limit of external data
... Thanks Aaron. ...
written 20 months ago by YaGalbi20
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Size limit of external data
... Hi all, I'm sure I have actually seen the answer to this in the guidelines but I cannot find it again. I'm creating an R package with EXTERNAL data for examples. I have 5 .rda files compressed with xz, each is approx. 2.2Mb, so around 11Mb in total. I need to know the file size limit of: 1) indivi ...
package development size limit external data written 20 months ago by YaGalbi20 • updated 20 months ago by Aaron Lun25k
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Comment: C: Upregulation and Downregulation of Gene Ontology terms
... I think biostars is more suitable for this question ...
written 20 months ago by YaGalbi20
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Comment: C: Upregulation and Downregulation of Gene Ontology terms
... it would be better to show us where it says that. It is not possible to "up-regulate" an ontology term. I think you have mis-read. ...
written 20 months ago by YaGalbi20
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Comment: C: Tissue Specificity R-package
... Oh wow thank you Jaro...I'll go through this tomorrow...but just some thoughts on what I'm considering doing:   1) The basic function of the package would be to take count data and simply calculate specificity from that. For anyone that can load a package in R its a fast algorithm that takes about ...
written 21 months ago by YaGalbi20
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Comment: C: Tissue Specificity R-package
... As you clearly have some experience with CellNet - does it have clear advantages or disadvantages? ...
written 21 months ago by YaGalbi20
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Comment: C: Tissue Specificity R-package
... thank you for that Jaro - I'll be looking into it. ...
written 21 months ago by YaGalbi20
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Tissue Specificity R-package
... Hello everyone, I have written a pipeline that takes count data and calculates tissue specificity. I am planning to make an R-package from this and go for publication. Before I begin packaging and writing drafts, I am doing my literature review and also looking to see if someone has created a packa ...
R package package development tissue specificity written 21 months ago by YaGalbi20 • updated 21 months ago by jaro.slamecka130
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Comment: C: Can't install ChIPpeakanno - "libmysqlclient was not found" - do I need to remov
... You legend .. That worked! :)  Any chance of a job? ;) haha  ...
written 21 months ago by YaGalbi20
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Can't install ChIPpeakanno - "libmysqlclient was not found" - do I need to remove latest version of R?
... Hi all,   I had ChIPpeakanno installed and working on the last versions of R and Rstudio. I recently updated to the latest version or R and Rstudio. Just now I tried to run ChIPpeakAnno and it was not installed. I tried installing with  source("https://bioconductor.org/biocLite.R") biocLite("Ch ...
chippeakanno written 21 months ago by YaGalbi20 • updated 21 months ago by Mike Smith4.0k

Latest awards to YaGalbi

Autobiographer 20 months ago, has more than 80 characters in the information field of the user's profile.
Popular Question 2.4 years ago, created a question with more than 1,000 views. For Differential binding of ATAC-seq data with no replicates

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