User: sebastian.lobentanzer

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Answer: A: DESeq2 error when creating the DESeqDataSet
... Solution: I recompiled all Bioconductor packages with source("https://bioconductor.org/biocLite.R") pkgs <- rownames(installed.packages()) biocLite(pkgs, type="source") and then restarted. ...
written 12 months ago by sebastian.lobentanzer0
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DESeq2 error when creating the DESeqDataSet
... I am trying to create a DESeqDataSet from a SummarizedExperiment. I am getting the error message: Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘assayNames’ for signature ‘"DESeqDataSet"’ While researching, I found this (verified) example to test wit ...

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Scholar 12 months ago, created an answer that has been accepted. For A: DESeq2 error when creating the DESeqDataSet

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