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dba.count with pre-defined regions produced only 10% results
DiffBind diffbind
updated 11 months ago by ★ 5.2k • written 11 months ago by ▴ 10
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692
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Diffbind matrix/batch effect/normalization
DiffBind
updated 16 months ago by ★ 5.2k • written 17 months ago by ▴ 10
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2.1k
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Comment: Comment: Too much data for Diffbind
18 months ago littlefishes20 ▴ 10
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12
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2.1k
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Too much data for Diffbind
DiffBind
19 months ago • updated 18 months ago littlefishes20 ▴ 10
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2.1k
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Comment: Comment: Too much data for Diffbind
18 months ago littlefishes20 ▴ 10
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1
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2.1k
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Comment: Comment: Too much data for Diffbind
18 months ago littlefishes20 ▴ 10
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2.1k
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Comment: Comment: Too much data for Diffbind
18 months ago littlefishes20 ▴ 10
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1
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2.1k
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Comment: Comment: Too much data for Diffbind
18 months ago littlefishes20 ▴ 10
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3
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1.6k
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GAGE: No significant output while it should have
GAGE
updated 6.6 years ago by ★ 1.6k • written 6.7 years ago by ▴ 10
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1.6k
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Comment: C: GAGE: No significant output while it should have
6.7 years ago littlefishes20 ▴ 10
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1.6k
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Comment: C: GAGE: No significant output while it should have
6.7 years ago littlefishes20 ▴ 10
7
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8
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1.4k
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limma: same data in different formats produces different DEG-analysis results
limma
6.9 years ago littlefishes20 ▴ 10
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1.4k
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Answer: A: limma: same data in different formats produces different DEG-analysis results
6.9 years ago littlefishes20 ▴ 10
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1.4k
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Comment: A: limma: same data in different formats produces different DEG-analysis results
6.9 years ago littlefishes20 ▴ 10
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1
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1.4k
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Comment: C: limma: same data in different formats produces different DEG-analysis results
6.9 years ago littlefishes20 ▴ 10
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0
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1.4k
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Comment: C: limma: same data in different formats produces different DEG-analysis results
6.9 years ago littlefishes20 ▴ 10
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1
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1.6k
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Comment: C: Using Combat function of SVA to remove known batch effect and using the result f
7.0 years ago littlefishes20 ▴ 10
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3
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1.6k
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Using Combat function of SVA to remove known batch effect and using the result for down-stream analysis
sva batch effect deseq2 edgeR
updated 7.0 years ago by ★ 28k • written 7.0 years ago by ▴ 10
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