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Comment: Comment: Running the DESeq2 "DESeqDataSetFromMatrix" function returns a dimname error
2.8 years ago swbarnes2 ★ 1.4k
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Comment: Comment: Running the DESeq2 "DESeqDataSetFromMatrix" function returns a dimname error
2.8 years ago swbarnes2 ★ 1.4k
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1
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1.4k
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Comment: Comment: Differential Expression analysis of specific list of genes
2.9 years ago swbarnes2 ★ 1.4k
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5.8k
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Comment: Comment: package to manipulate GTF files
2.9 years ago swbarnes2 ★ 1.4k
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5.8k
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Comment: Comment: package to manipulate GTF files
2.9 years ago swbarnes2 ★ 1.4k
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1
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3.2k
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Comment: Comment: Problem with DESeq2 installation using in R 1.4.1717
2.9 years ago swbarnes2 ★ 1.4k
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Comment: Comment: DeSEq2-- error- count matrix
2.9 years ago swbarnes2 ★ 1.4k
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1.3k
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Comment: Comment: How to correlate bp and Chr columns in the corresponding RSID column?
2.9 years ago swbarnes2 ★ 1.4k
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Comment: Comment: extract fold change of a list of gene from EdgeR?
2.9 years ago swbarnes2 ★ 1.4k
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1.4k
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Comment: Comment: Error: $ operator is invalid for atomic vectors
2.9 years ago swbarnes2 ★ 1.4k
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2.4k
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Comment: Comment: extract fold change of a list of gene from EdgeR?
2.9 years ago swbarnes2 ★ 1.4k
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1
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2.4k
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Comment: Comment: extract fold change of a list of gene from EdgeR?
2.9 years ago swbarnes2 ★ 1.4k
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0
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983
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Comment: Comment: Contrasting LogFCs in DESeq2
3.0 years ago swbarnes2 ★ 1.4k
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2.9k
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Comment: Comment: DESeq2 comparison two cell types and two genotypes
3.1 years ago swbarnes2 ★ 1.4k
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0
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3.2k
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Comment: Comment: DESeq2 two conditions with interaction
3.1 years ago swbarnes2 ★ 1.4k
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15
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1.3k
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Comment: Comment: DiffBind DEseq
3.1 years ago swbarnes2 ★ 1.4k
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1.3k
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Comment: Comment: DiffBind DEseq
3.1 years ago swbarnes2 ★ 1.4k
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1
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6.2k
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Comment: Comment: DESeq2 - multifactorial design
3.2 years ago swbarnes2 ★ 1.4k
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6.2k
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Comment: Comment: DESeq2 - multifactorial design
3.2 years ago swbarnes2 ★ 1.4k
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840
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Comment: Comment: I can't get the 2 by 2 comparisons that I need because the matrix is not full of
3.3 years ago swbarnes2 ★ 1.4k
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1.6k
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Comment: Comment: DEseq2: setting up the correct contrast.
3.3 years ago swbarnes2 ★ 1.4k
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2
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1.6k
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Comment: Comment: RUVSeq package for adjusting two variables of interest
3.3 years ago swbarnes2 ★ 1.4k
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0
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952
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Comment: Comment: DESeq2 anormally high estimation of Log2FoldChange
3.3 years ago swbarnes2 ★ 1.4k
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1.4k
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Comment: Comment: P adjusted values in Deseq2
3.4 years ago swbarnes2 ★ 1.4k
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1
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2.3k
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Comment: Comment: Using the correct counts with lm function linear model
3.4 years ago swbarnes2 ★ 1.4k
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1
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2.3k
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Comment: Comment: Using the correct counts with lm function linear model
3.4 years ago swbarnes2 ★ 1.4k
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1.1k
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Comment: Comment: R package to change protein *.msf file to any readable file
3.5 years ago swbarnes2 ★ 1.4k
1
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0
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978
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Comment: Comment: Limma: Differential expression with two batch effects , location and batch.
3.5 years ago swbarnes2 ★ 1.4k
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1
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2.8k
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Comment: Comment: Compare 3 RNASeq groups with no control in DESeq2
3.5 years ago swbarnes2 ★ 1.4k
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1
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768
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Comment: Comment: DESeq2 interaction study
3.5 years ago swbarnes2 ★ 1.4k
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1
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757
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Comment: Comment: Using DESeq with 2 assays having 2 conditions
3.6 years ago swbarnes2 ★ 1.4k
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1.3k
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Comment: C: Extracting coordinates of points in an image
3.6 years ago swbarnes2 ★ 1.4k
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1
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1.2k
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Comment: C: How can I combine results tables into a single output?
3.7 years ago swbarnes2 ★ 1.4k
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4.5k
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Comment: C: How to add pseudocount to DESeq2 dds object
3.7 years ago swbarnes2 ★ 1.4k
1
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1
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2.5k
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Comment: C: DESeq2 Installation Errors
3.7 years ago swbarnes2 ★ 1.4k
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0
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5.3k
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Comment: C: How to use RSEM value to find differentially expressed genes
3.7 years ago swbarnes2 ★ 1.4k
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0
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747
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Comment: C: DESeq2 reporting >10,000 DEGs
3.8 years ago swbarnes2 ★ 1.4k
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1
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747
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Comment: C: DESeq2 reporting >10,000 DEGs
3.8 years ago swbarnes2 ★ 1.4k
2
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0
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2.9k
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Comment: C: How to incorporate batch effect that is only present in one level into the desig
3.8 years ago swbarnes2 ★ 1.4k
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1
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2.1k
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Comment: C: Error Message in DESEQ (DESEQDataSetFromMatrix)
3.8 years ago swbarnes2 ★ 1.4k
0
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1
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2.6k
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Comment: C: Convert mouse gene ids to hamster gene ids
3.9 years ago swbarnes2 ★ 1.4k
0
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1
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423
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Comment: C: Two data set: Control sample is one data set and Case is another data with Time-
3.9 years ago swbarnes2 ★ 1.4k
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1
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1.8k
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Comment: C: Filter Out Low Read Counts
3.9 years ago swbarnes2 ★ 1.4k
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0
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445
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Comment: C: How to treat genes in RNAseq analyses
4.0 years ago swbarnes2 ★ 1.4k
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1
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1.4k
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Comment: C: Nested design matrix in edgeR
4.0 years ago swbarnes2 ★ 1.4k
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0
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2.8k
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Comment: C: Peer's Certificate issuer is not recognized
4.0 years ago swbarnes2 ★ 1.4k
1
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0
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473
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Comment: C: DESEQ2 error after adding batch in design
4.0 years ago swbarnes2 ★ 1.4k
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3
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19k
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Comment: C: having trouble formatting data for DE analysis
4.1 years ago swbarnes2 ★ 1.4k
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1
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1.5k
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Comment: C: Error:could not find function "DESeqDataSetFromHTSeqCount"
4.1 years ago swbarnes2 ★ 1.4k
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0
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1.6k
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Comment: C: biomaRt getBM() returns nothing most of the times
4.2 years ago swbarnes2 ★ 1.4k
203 results • Page 3 of 5
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