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Comment: Function 'sexp_as_cholmod_sparse' doesn't exist in the package 'Matrix'
5 weeks ago
alan.ocallaghan
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Comment:
Comment: Function 'sexp_as_cholmod_sparse' doesn't exist in the package 'Matrix'
5 weeks ago
alan.ocallaghan
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Comment: plotUMAP and ggplotly Cell IDs Display
3 months ago
alan.ocallaghan
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6.5k
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Comment: scater runUMAP fails with error "function 'as_cholmod_sparse' not provided by pa
5 months ago
alan.ocallaghan
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868
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Comment: plotHeatmap annotation error
10 months ago
alan.ocallaghan
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868
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Comment: plotHeatmap annotation error
10 months ago
alan.ocallaghan
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1.8k
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Comment:
Comment: Installing densvis on a Singularity container
11 months ago
alan.ocallaghan
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1.8k
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Comment: Installing densvis on a Singularity container
11 months ago
alan.ocallaghan
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655
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Comment: cell_count column in SpatialExperiment Object
15 months ago
alan.ocallaghan
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Comment: What number components should I use if I want to show 2D and 3D UMAP
18 months ago
alan.ocallaghan
▴ 160
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3.8k
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Comment: Adding labels on clusters in a t-SNE plot and changing colors
20 months ago
alan.ocallaghan
▴ 160
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2
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2.0k
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Comment: how to make the "reconstructed" value in intergated scRNA-seq UMAP plot more rea
21 months ago
alan.ocallaghan
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1.7k
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Comment: calculateTSNE with large dataset
2.2 years ago
alan.ocallaghan
▴ 160
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922
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Comment: How to answer reviewers question of physical cell size influencing single cell r
2.2 years ago
alan.ocallaghan
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2.9k
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Comment: runPCA error / Error in runSVD(x, k = rank, nu = ifelse(get.pcs, rank, 0), nv =
2.2 years ago
alan.ocallaghan
▴ 160
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2.9k
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Comment:
Comment: runPCA error / Error in runSVD(x, k = rank, nu = ifelse(get.pcs, rank, 0), nv =
2.2 years ago
alan.ocallaghan
▴ 160
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1.1k
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Comment: More than 3 dimensions in runTSNE
2.4 years ago
alan.ocallaghan
▴ 160
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1.3k
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Comment: how to stop plotDots() from sorting my features (genes) ?
3.2 years ago
alan.ocallaghan
▴ 160
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2.3k
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Comment:
Comment: What lengths are used to calculate TPM in "scater" package
3.5 years ago
alan.ocallaghan
▴ 160
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1.0k
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Comment:
C: Change annotation colors plotHeatmap
3.6 years ago
alan.ocallaghan
▴ 160
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966
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Comment:
C: Multiple problems with BiocWorkflowTools
4.2 years ago
alan.ocallaghan
▴ 160
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966
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Comment:
C: Multiple problems with BiocWorkflowTools
4.2 years ago
alan.ocallaghan
▴ 160
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966
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Comment:
C: Multiple problems with BiocWorkflowTools
4.2 years ago
alan.ocallaghan
▴ 160
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1
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966
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Comment:
C: Multiple problems with BiocWorkflowTools
4.2 years ago
alan.ocallaghan
▴ 160
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