Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
2.0k
views
Comment: Comment: scater runUMAP fails with error "function 'as_cholmod_sparse' not provided by pa
24 days ago alan.ocallaghan ▴ 120
0
votes
1
reply
797
views
Answer: Answer: Is logNormCounts log2 normalised counts as default?
3 months ago alan.ocallaghan ▴ 120
0
votes
0
replies
631
views
Answer: Answer: plotHeatmap annotation error
5 months ago alan.ocallaghan ▴ 120
0
votes
1
reply
631
views
Comment: Comment: plotHeatmap annotation error
5 months ago alan.ocallaghan ▴ 120
0
votes
1
reply
631
views
Comment: Comment: plotHeatmap annotation error
5 months ago alan.ocallaghan ▴ 120
0
votes
0
replies
1.4k
views
Comment: Comment: Installing densvis on a Singularity container
6 months ago alan.ocallaghan ▴ 120
0
votes
0
replies
1.4k
views
Comment: Comment: Installing densvis on a Singularity container
6 months ago alan.ocallaghan ▴ 120
0
votes
0
replies
465
views
Comment: Comment: cell_count column in SpatialExperiment Object
10 months ago alan.ocallaghan ▴ 120
1
vote
1
reply
913
views
Comment: Comment: What number components should I use if I want to show 2D and 3D UMAP
14 months ago alan.ocallaghan ▴ 120
1
vote
1
reply
3.4k
views
Comment: Comment: Adding labels on clusters in a t-SNE plot and changing colors
15 months ago alan.ocallaghan ▴ 120
0
votes
2
replies
1.7k
views
Comment: Comment: how to make the "reconstructed" value in intergated scRNA-seq UMAP plot more rea
16 months ago alan.ocallaghan ▴ 120
3
votes
1
reply
1.2k
views
Answer: Answer: FeaturePlot in scater
17 months ago alan.ocallaghan ▴ 120
0
votes
0
replies
2.5k
views
Answer: Answer: runPCA error / Error in runSVD(x, k = rank, nu = ifelse(get.pcs, rank, 0), nv =
21 months ago alan.ocallaghan ▴ 120
0
votes
1
reply
1.4k
views
Comment: Comment: calculateTSNE with large dataset
21 months ago alan.ocallaghan ▴ 120
1
vote
1
reply
1.4k
views
Answer: Answer: calculateTSNE with large dataset
21 months ago alan.ocallaghan ▴ 120
1
vote
1
reply
768
views
Comment: Comment: How to answer reviewers question of physical cell size influencing single cell r
21 months ago alan.ocallaghan ▴ 120
0
votes
1
reply
2.5k
views
Comment: Comment: runPCA error / Error in runSVD(x, k = rank, nu = ifelse(get.pcs, rank, 0), nv =
22 months ago alan.ocallaghan ▴ 120
0
votes
1
reply
2.5k
views
Comment: Comment: runPCA error / Error in runSVD(x, k = rank, nu = ifelse(get.pcs, rank, 0), nv =
22 months ago alan.ocallaghan ▴ 120
1
vote
1
reply
989
views
Comment: Comment: More than 3 dimensions in runTSNE
2.0 years ago alan.ocallaghan ▴ 120
0
votes
0
replies
1.1k
views
Comment: Comment: how to stop plotDots() from sorting my features (genes) ?
2.8 years ago alan.ocallaghan ▴ 120
2
votes
1
reply
1.1k
views
Answer: Answer: how to stop plotDots() from sorting my features (genes) ?
2.8 years ago alan.ocallaghan ▴ 120
1
vote
0
replies
2.1k
views
Comment: Comment: What lengths are used to calculate TPM in "scater" package
3.1 years ago alan.ocallaghan ▴ 120
0
votes
0
replies
912
views
Comment: C: Change annotation colors plotHeatmap
3.2 years ago alan.ocallaghan ▴ 120
0
votes
0
replies
831
views
Comment: C: Multiple problems with BiocWorkflowTools
3.8 years ago alan.ocallaghan ▴ 120
0
votes
1
reply
831
views
Comment: C: Multiple problems with BiocWorkflowTools
3.8 years ago alan.ocallaghan ▴ 120
2
votes
6
replies
831
views
Multiple problems with BiocWorkflowTools
BiocWorkflowTools
updated 3.8 years ago by ★ 6.2k • written 3.8 years ago by ▴ 120
0
votes
0
replies
831
views
Comment: C: Multiple problems with BiocWorkflowTools
3.8 years ago alan.ocallaghan ▴ 120
0
votes
1
reply
831
views
Comment: C: Multiple problems with BiocWorkflowTools
3.8 years ago alan.ocallaghan ▴ 120
1
vote
1
reply
847
views
Subsetting samples and columns of a MethyLumiSet subsets QC probes
methylumi
updated 6.1 years ago by 21k • written 6.1 years ago by ▴ 120
29 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6