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0
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2
replies
1.6k
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Answer: A: pileupAsGRanges depth limit
11.8 years ago Martin Morgan 25k
0
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1
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2.7k
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Answer: A: readFastq, writeFastq, compressed files and unix pipes.
11.8 years ago Martin Morgan 25k
0
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0
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2.7k
views
Answer: A: readFastq, writeFastq, compressed files and unix pipes.
11.8 years ago Martin Morgan 25k
0
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1
reply
1.4k
views
Answer: A: pileupAsGRanges hangs
11.8 years ago Martin Morgan 25k
0
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0
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3.1k
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Comment: C: gene set enrichment
11.9 years ago Martin Morgan 25k
0
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0
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896
views
readAligned with bowtie2 input
Alignment Cancer ShortRead Alignment Cancer ShortRead
11.9 years ago Martin Morgan 25k
0
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1
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644
views
Answer: A: report a possble bug in shortread
11.9 years ago Martin Morgan 25k
0
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1
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1.6k
views
Comment: C: [ggbio+GenomicRanges] auto-plotting GRanges in R-devel fails
11.9 years ago Martin Morgan 25k
0
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1
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3.9k
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Comment: C: Weird things happening with minfi and RcppEigen
11.9 years ago Martin Morgan 25k
0
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0
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2.7k
views
Answer: A: How to access custom SAM tags (Rsamtools?)
11.9 years ago Martin Morgan 25k
0
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0
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4.0k
views
Comment: C: reading BAM files
11.9 years ago Martin Morgan 25k
0
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2
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934
views
Answer: A: any package can be used to extract SNP from bam or pileup file
11.9 years ago Martin Morgan 25k
0
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0
replies
3.2k
views
Comment: C: Subsetting expression sets for mass spec data - second ask
11.9 years ago Martin Morgan 25k
0
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1
reply
1.2k
views
Answer: A: Rsamtools bam to ShortReadQ for export
11.9 years ago Martin Morgan 25k
0
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0
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4.0k
views
Answer: A: reading BAM files
11.9 years ago Martin Morgan 25k
0
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0
replies
1.1k
views
Answer: A: GeneSetCollection with GOCollection and ontology argument
11.9 years ago Martin Morgan 25k
0
votes
0
replies
3.7k
views
Answer: A: lapack routines cannot be loaded [Help request]
11.9 years ago Martin Morgan 25k
0
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1
reply
1.2k
views
Answer: A: pooling for parallel hierarchical operations
11.9 years ago Martin Morgan 25k
0
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1
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1.3k
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Answer: A: FastqSampler sort by ID
11.9 years ago Martin Morgan 25k
0
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0
replies
1.0k
views
Comment: C: how to get the quality score system information from the reads
11.9 years ago Martin Morgan 25k
0
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1
reply
1.0k
views
Answer: A: how to get the quality score system information from the reads
11.9 years ago Martin Morgan 25k
0
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1
reply
669
views
Comment: C: extracting a column as a vector.
11.9 years ago Martin Morgan 25k
0
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1
reply
1.1k
views
Comment: C: VariantAnnotation development branch issue
11.9 years ago Martin Morgan 25k
0
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0
replies
1.1k
views
Comment: C: R2.15.2 Rsamtools icc compiler bam_md.c(315) et al
11.9 years ago Martin Morgan 25k
0
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0
replies
808
views
Answer: A: GraphNEL object retrieve edgenumber from acc() or is it list of lists?
11.9 years ago Martin Morgan 25k
0
votes
0
replies
618
views
Answer: A: error in annotating a list of probeIDs
11.9 years ago Martin Morgan 25k
0
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1
reply
1.1k
views
Answer: A: R2.15.2 Rsamtools icc compiler bam_md.c(315) et al
11.9 years ago Martin Morgan 25k
0
votes
0
replies
3.1k
views
Comment: C: Problem installing goseq and RCurl
11.9 years ago Martin Morgan 25k
2
votes
1
reply
3.2k
views
Answer: A: How to get sequences corresponding to a GRanges?
12.0 years ago Martin Morgan 25k
0
votes
1
reply
904
views
Answer: A: makeProbePackage deprecated in AnnotationDbi ?
12.0 years ago Martin Morgan 25k
0
votes
0
replies
1.2k
views
Answer: A: trimTails function in ShortRead package give different results on the same input
12.0 years ago Martin Morgan 25k
0
votes
1
reply
5.6k
views
Comment: C: Rgraphviz: how to read a \"dot\" file?
12.0 years ago Martin Morgan 25k
0
votes
2
replies
1.5k
views
Comment: C: gdata affects LumiBatch::combine method
12.0 years ago Martin Morgan 25k
0
votes
1
reply
1.5k
views
Answer: A: gdata affects LumiBatch::combine method
12.0 years ago Martin Morgan 25k
0
votes
0
replies
2.2k
views
Comment: C: NOISeq installation error
12.0 years ago Martin Morgan 25k
0
votes
1
reply
1.5k
views
Comment: C: Error in makeTranscriptDbFromBiomart
12.0 years ago Martin Morgan 25k
0
votes
1
reply
1.4k
views
Answer: A: biomaRt error in scan file
12.0 years ago Martin Morgan 25k
0
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0
replies
2.1k
views
Answer: A: impute package
12.0 years ago Martin Morgan 25k
0
votes
1
reply
757
views
Comment: C: Feature request in readVcf
12.1 years ago Martin Morgan 25k
0
votes
1
reply
806
views
Answer: A: multicore and GRangesList [Resurrected]
12.1 years ago Martin Morgan 25k
0
votes
0
replies
1.2k
views
Answer: A: how does ShortRead function identify score system
12.1 years ago Martin Morgan 25k
0
votes
1
reply
2.6k
views
Answer: A: exomeCopy - memory error
12.1 years ago Martin Morgan 25k
0
votes
0
replies
1.4k
views
Comment: C: How to filter a list of genes by their ontology
12.1 years ago Martin Morgan 25k
0
votes
0
replies
820
views
Answer: A: read sequences from fasta file starting with > sign and untill next > sign
12.1 years ago Martin Morgan 25k
0
votes
0
replies
704
views
Answer: A: finding end of file in FASTA file
12.1 years ago Martin Morgan 25k
0
votes
0
replies
793
views
Course Announcement: Advanced R / Bioconductor Programming, Oct. 15-16, Seattle, WA
Cancer Cancer
12.1 years ago Martin Morgan 25k
0
votes
0
replies
2.3k
views
Answer: A: getSRAdbFile cannot open URL
12.1 years ago Martin Morgan 25k
0
votes
1
reply
4.7k
views
Comment: C: how to build a R package with the inclusion of inst/extdata
12.1 years ago Martin Morgan 25k
0
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1
reply
1.2k
views
Answer: A: GenomicFeatures Installation Problem
12.1 years ago Martin Morgan 25k
0
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1
reply
1.5k
views
Comment: C: subdivideGRanges() to a given number of ranges
12.1 years ago Martin Morgan 25k
3,537 results • Page 50 of 71
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