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Comment: Comment: limma technical repeat correction
14 months ago Gordon Smyth 53k
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2.8k
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Comment: Comment: limma technical repeat correction
14 months ago Gordon Smyth 53k
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1.2k
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Comment: Comment: Analysis of 2*4 factorial design
14 months ago Gordon Smyth 53k
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3.5k
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Comment: Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
14 months ago Gordon Smyth 53k
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1.2k
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Comment: Comment: RNA-seq: samples form different experiments, how to do DGEs?
14 months ago Gordon Smyth 53k
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1.9k
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Comment: Comment: Zero intra-block correlation in RRBS analysis using voomLmFit with block
14 months ago Gordon Smyth 53k
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1.2k
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Answer: Answer: RNA-seq: samples form different experiments, how to do DGEs?
14 months ago Gordon Smyth 53k
2
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1
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1.2k
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Answer: Answer: Analysis of 2*4 factorial design
14 months ago Gordon Smyth 53k
1
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1
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1.9k
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Comment: Comment: Zero intra-block correlation in RRBS analysis using voomLmFit with block
14 months ago Gordon Smyth 53k
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2
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2.8k
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Answer: Answer: limma technical repeat correction
14 months ago Gordon Smyth 53k
1
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Comment: Comment: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
14 months ago Gordon Smyth 53k
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Comment: Comment: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
14 months ago Gordon Smyth 53k
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Comment: Comment: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
14 months ago Gordon Smyth 53k
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2.0k
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Answer: Answer: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
14 months ago Gordon Smyth 53k
2
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1
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1.9k
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Answer: Answer: Zero intra-block correlation in RRBS analysis using voomLmFit with block
14 months ago Gordon Smyth 53k
0
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3.0k
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Comment: Comment: Bioconductor 3.20 Release Schedule
14 months ago Gordon Smyth 53k
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2
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3.0k
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Answer: Answer: Bioconductor 3.20 Release Schedule
14 months ago Gordon Smyth 53k
1
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981
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Answer: Answer: Automatically generate contrasts from a model matrix / formula
15 months ago Gordon Smyth 53k
2
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1
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803
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Answer: Answer: How to subset voomLmFit (MArrayLM) object?
15 months ago Gordon Smyth 53k
4
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703
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Answer: Answer: edgeR 4.2.1 compression bug: a minimally reproducible snippet
15 months ago Gordon Smyth 53k
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843
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Answer: Answer: EdgeR - Apparent Wrong Direction of logFC with Low Count Data
15 months ago Gordon Smyth 53k
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740
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Comment: Comment: Question on performing ANOVA-like analysis using limma
15 months ago Gordon Smyth 53k
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740
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Answer: Answer: Question on performing ANOVA-like analysis using limma
15 months ago Gordon Smyth 53k
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1.5k
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Comment: Comment: AffylmGUI does not start wit R 4.4.1
15 months ago Gordon Smyth 53k
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1.5k
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Comment: Comment: AffylmGUI does not start wit R 4.4.1
16 months ago Gordon Smyth 53k
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1.5k
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Comment: Comment: AffylmGUI does not start wit R 4.4.1
16 months ago Gordon Smyth 53k
1
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907
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Answer: Answer: Help with design matrix for RNA-seq data using edgeR
16 months ago Gordon Smyth 53k
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Comment: Comment: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
16 months ago Gordon Smyth 53k
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1.6k
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Comment: Comment: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
16 months ago Gordon Smyth 53k
1
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1
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1.6k
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Answer: Answer: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
16 months ago Gordon Smyth 53k
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1
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1.6k
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Comment: Comment: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
16 months ago Gordon Smyth 53k
3
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989
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Answer: Answer: voom does not seem to properly correct for library size
16 months ago Gordon Smyth 53k
1
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2
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1.5k
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Answer: Answer: AffylmGUI does not start wit R 4.4.1
16 months ago Gordon Smyth 53k
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1.6k
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Answer: Answer: RNASeq normlization for samples with global shift in gene expression
16 months ago Gordon Smyth 53k
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1.0k
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Answer: Answer: Differential expression analysis in time course experiments with DESeq2
16 months ago Gordon Smyth 53k
3
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1.4k
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Answer: Answer: using limma trend workflow in CAMERA
17 months ago Gordon Smyth 53k
1
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1.0k
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Comment: Comment: One-sided tests with CAMERA-PR
17 months ago Gordon Smyth 53k
2
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1.0k
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Answer: Answer: One-sided tests with CAMERA-PR
17 months ago Gordon Smyth 53k
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1.1k
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Answer: Answer: comparing common differentially expressed genes from two Rna-Seq Dataset.
17 months ago Gordon Smyth 53k
2
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2
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1.4k
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Answer: Answer: RUV - Does my data need further normalisation?
17 months ago Gordon Smyth 53k
0
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845
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Answer: Answer: edgeR - design a complex matrix
17 months ago Gordon Smyth 53k
1
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1.1k
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Answer: Answer: Optimizing CPM Calculation for Varied RNA-seq Data
17 months ago Gordon Smyth 53k
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1.2k
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Comment: Comment: how limma work with continous variables
17 months ago Gordon Smyth 53k
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0
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2.7k
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Comment: Comment: LIMMA 2x2 Factorial Design with Paired Samples
17 months ago Gordon Smyth 53k
0
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1
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1.2k
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Comment: Comment: how limma work with continous variables
17 months ago Gordon Smyth 53k
1
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0
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1.3k
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Comment: Comment: limma and Syntactically Invalid Factor Values
17 months ago Gordon Smyth 53k
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1
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1.3k
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Comment: Comment: limma and Syntactically Invalid Factor Values
17 months ago Gordon Smyth 53k
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2
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2.7k
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Comment: Comment: LIMMA 2x2 Factorial Design with Paired Samples
18 months ago Gordon Smyth 53k
2
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1
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2.7k
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Answer: Answer: LIMMA 2x2 Factorial Design with Paired Samples
18 months ago Gordon Smyth 53k
0
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0
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624
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Answer: Answer: featureCounts from Rsubread
18 months ago Gordon Smyth 53k
5,317 results • Page 4 of 107
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