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Answer: Answer: Cannabis OrgDb
8 days ago Guido Hooiveld ★ 3.9k
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175
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Answer: Answer: OrgDb for maize
13 days ago Guido Hooiveld ★ 3.9k
2
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1
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186
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Answer: Answer: How many of my genes from my gene list are in each KEGG pathway?
19 days ago Guido Hooiveld ★ 3.9k
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343
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Answer: Answer: The order of those tied genes will be arbitrary, which may produce unexpected re
5 weeks ago Guido Hooiveld ★ 3.9k
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1.5k
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Answer: Answer: enrichGOgradient color change
6 weeks ago Guido Hooiveld ★ 3.9k
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1
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310
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Answer: Answer: Problem with buildGOmap from clusterProfiler
12 weeks ago Guido Hooiveld ★ 3.9k
0
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1
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379
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Answer: Answer: Error Oligo package asking for pd.2.0 package annotation
4 months ago Guido Hooiveld ★ 3.9k
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1
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648
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Answer: Answer: It's possible to use clusterProfiler without an annotationDBI package
5 months ago Guido Hooiveld ★ 3.9k
1
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858
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Answer: Answer: Cluster profiler emap plot - what are the annotations?
7 months ago Guido Hooiveld ★ 3.9k
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1
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1.1k
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Answer: Answer: apply clusterProfiler::simplify on merge_result list
8 months ago Guido Hooiveld ★ 3.9k
2
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1
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435
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Answer: Answer: Broken UNITE 9.0 link (General FASTA Release)
8 months ago Guido Hooiveld ★ 3.9k
1
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1
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491
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Answer: Answer: Affymetrix analysis Chiptype hgu133plus2hsentrezg.db vs hgu133plus2.db
10 months ago Guido Hooiveld ★ 3.9k
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1
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1.3k
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Answer: Answer: enrichKEGG function error
12 months ago Guido Hooiveld ★ 3.9k
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1.2k
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Answer: Answer: Error with Pathview: Bad Request (HTTP 400)
12 months ago Guido Hooiveld ★ 3.9k
0
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0
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391
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Answer: Answer: Can a expressed gene dataset yielded after CPM be used in DESeq2 and EdgeR?
13 months ago Guido Hooiveld ★ 3.9k
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1
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1.2k
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Answer: Answer: pathview: Warning: Failed to download KEGG xml/png files, hsa04110 skipped!
13 months ago Guido Hooiveld ★ 3.9k
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4.7k
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Answer: Answer: KEGG enrichment in R and gene IDs
13 months ago Guido Hooiveld ★ 3.9k
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1
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3.8k
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Answer: Answer: Reduce the number of nodes appear in the cnetplot of clusterprofiler
13 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.1k
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Answer: Answer: Is ther an annotation package for sheep (Ovis aries)
15 months ago Guido Hooiveld ★ 3.9k
1
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1
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622
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Answer: Answer: select with org.Mm.eg.db does not give ENSEMBL ids
15 months ago Guido Hooiveld ★ 3.9k
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2.1k
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Answer: Answer: clusterProfiler - custom annotations
16 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.5k
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Answer: Answer: Adding geneID to list of gene locus IDs
17 months ago Guido Hooiveld ★ 3.9k
1
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1
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965
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Answer: Answer: Limma adj.p.value the same for many different p.values
19 months ago Guido Hooiveld ★ 3.9k
1
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1
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5.5k
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Answer: Answer: ClusterProfiler DotPlot Vs Ridgeplot
20 months ago Guido Hooiveld ★ 3.9k
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0
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5.1k
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Answer: Answer: Any tools to convert .gff to .gtf format
20 months ago Guido Hooiveld ★ 3.9k
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0
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570
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Answer: Answer: Data visualization
20 months ago Guido Hooiveld ★ 3.9k
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0
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2.4k
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Answer: Answer: Annotation in pheatmap
21 months ago Guido Hooiveld ★ 3.9k
0
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1
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3.3k
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Answer: Answer: What is the significance of "Zero Cross" in Ranked List Metric in Gene Set Enric
22 months ago Guido Hooiveld ★ 3.9k
0
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0
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858
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Answer: Answer: Using queryMany() in mygene package: Problem of querying Entrez gene IDs based o
22 months ago Guido Hooiveld ★ 3.9k
1
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1
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7.6k
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Answer: Answer: ENSEMBL to ENTREZ ID
22 months ago Guido Hooiveld ★ 3.9k
0
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0
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793
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Answer: Answer: Pathview error Warning: Parsing ./mmu04928.xml file failed, please check the fil
22 months ago Guido Hooiveld ★ 3.9k
3
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1
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3.6k
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Answer: Answer: Pathview unable to download pathways
22 months ago • updated 20 months ago Guido Hooiveld ★ 3.9k
1
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0
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894
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Answer: Answer: Can't load UCSC transcript IDs
22 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.9k
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Answer: Answer: TERM2NAME for enricher if I have list of GO IDs
23 months ago Guido Hooiveld ★ 3.9k
0
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2
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1.5k
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Answer: Answer: help pleaseļ¼
23 months ago Guido Hooiveld ★ 3.9k
2
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1
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3.3k
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Answer: Answer: UniprotKB AC/ID to Entrez ID Conversion
23 months ago Guido Hooiveld ★ 3.9k
2
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1
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1.9k
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Answer: Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
23 months ago Guido Hooiveld ★ 3.9k
0
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2
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2.8k
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Answer: Answer: EnrichGO not working with db created from annotationhub
23 months ago Guido Hooiveld ★ 3.9k
2
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0
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2.1k
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Answer: Answer: enrichKEGG
2.0 years ago Guido Hooiveld ★ 3.9k
0
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0
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3.7k
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Answer: Answer: Best way to do RNA-seq analysis for a small number of samples obtained from 2 di
2.0 years ago Guido Hooiveld ★ 3.9k
0
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1
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3.8k
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Answer: Answer: ClusterProfiler dotplot mapping fold change to colour of dots
2.0 years ago Guido Hooiveld ★ 3.9k
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0
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3.7k
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Answer: Answer: Gene body coverage plot
2.1 years ago Guido Hooiveld ★ 3.9k
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0
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2.2k
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Answer: Answer: Filtering Clusterprofiler Result Object
2.3 years ago Guido Hooiveld ★ 3.9k
0
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0
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990
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Answer: Answer: Not obtaining specified GO BPs in compareCluster dotplot
2.4 years ago Guido Hooiveld ★ 3.9k
0
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1
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1.5k
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Answer: Answer: Too many genes in GO term after enrichGO
2.4 years ago Guido Hooiveld ★ 3.9k
3
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1
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3.2k
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Answer: Answer: gseGO input list
2.5 years ago Guido Hooiveld ★ 3.9k
1
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1
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2.6k
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Answer: Answer: enrichDGN result can't be visualised by barplot
2.6 years ago Guido Hooiveld ★ 3.9k
1
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1
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1.0k
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Answer: Answer: oligo package blas error
2.6 years ago Guido Hooiveld ★ 3.9k
0
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0
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1.2k
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Answer: Answer: enrichGO analysis
2.7 years ago Guido Hooiveld ★ 3.9k
3
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0
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1.2k
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Answer: Answer: [PrimeView] Affymetrix Human Gene Expression Array
2.8 years ago Guido Hooiveld ★ 3.9k
168 results • Page 1 of 4
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