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Comment: Comment: Genelist input for ClusterProfiler
10 months ago Guido Hooiveld ★ 3.9k
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5.6k
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Comment: Comment: Ensembl plants at annotationHub?
11 months ago Guido Hooiveld ★ 3.9k
0
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1
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1.1k
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Comment: Comment: enhanced volcano , different -log10pvalue of the same gene
11 months ago Guido Hooiveld ★ 3.9k
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1
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1.1k
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Comment: Comment: failed to use tximport for creating count matrix from kallisto
11 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.1k
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Comment: Comment: failed to use tximport for creating count matrix from kallisto
11 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.1k
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Comment: Comment: failed to use tximport for creating count matrix from kallisto
12 months ago Guido Hooiveld ★ 3.9k
0
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1
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1.3k
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Comment: Comment: enrichKEGG function error
12 months ago Guido Hooiveld ★ 3.9k
0
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1
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1.3k
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Answer: Answer: enrichKEGG function error
12 months ago Guido Hooiveld ★ 3.9k
1
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0
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1.2k
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Answer: Answer: Error with Pathview: Bad Request (HTTP 400)
12 months ago Guido Hooiveld ★ 3.9k
0
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1
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880
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Comment: Comment: Unable to install BiocManager
12 months ago Guido Hooiveld ★ 3.9k
0
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0
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1.1k
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Comment: Comment: how to add an enrichment score to a kegg pathway enrichment analysis?
13 months ago Guido Hooiveld ★ 3.9k
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0
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391
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Answer: Answer: Can a expressed gene dataset yielded after CPM be used in DESeq2 and EdgeR?
13 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.1k
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Comment: Comment: how to add an enrichment score to a kegg pathway enrichment analysis?
13 months ago Guido Hooiveld ★ 3.9k
1
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0
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1.4k
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Comment: Comment: Failed to install Biobase
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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1.2k
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Answer: Answer: pathview: Warning: Failed to download KEGG xml/png files, hsa04110 skipped!
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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4.7k
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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4.7k
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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4.7k
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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4.7k
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Comment: Comment: KEGG enrichment in R and gene IDs
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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4.7k
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Answer: Answer: KEGG enrichment in R and gene IDs
13 months ago Guido Hooiveld ★ 3.9k
0
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0
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1.2k
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Comment: Comment: Am I able to add gene names/symbols to an enrichGO() output?
13 months ago Guido Hooiveld ★ 3.9k
0
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0
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3.8k
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Comment: Comment: Reduce the number of nodes appear in the cnetplot of clusterprofiler
13 months ago Guido Hooiveld ★ 3.9k
0
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0
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3.8k
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Comment: Comment: Reduce the number of nodes appear in the cnetplot of clusterprofiler
13 months ago Guido Hooiveld ★ 3.9k
0
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1
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3.8k
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Answer: Answer: Reduce the number of nodes appear in the cnetplot of clusterprofiler
13 months ago Guido Hooiveld ★ 3.9k
1
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0
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4.4k
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Comment: Comment: gseKEGG - no gene can be mapped (RNAseq analysis)
14 months ago Guido Hooiveld ★ 3.9k
0
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0
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1.8k
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Comment: Comment: Problem with universe argument in enrichKEGG
14 months ago Guido Hooiveld ★ 3.9k
0
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1
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2.0k
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Comment: Comment: clusterProfiler for KEGG enrichment (non-model species) Over-Representation Anal
14 months ago Guido Hooiveld ★ 3.9k
1
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1
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2.0k
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Comment: Comment: clusterProfiler for KEGG enrichment (non-model species) Over-Representation Anal
14 months ago Guido Hooiveld ★ 3.9k
1
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0
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1.1k
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Comment: Comment: Is ther an annotation package for sheep (Ovis aries)
15 months ago Guido Hooiveld ★ 3.9k
0
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1
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2.2k
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Comment: Comment: AnnotationForge::makeOrgPackageFromNCBI - ERROR to access url (NCBI FTP site)
15 months ago Guido Hooiveld ★ 3.9k
0
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2
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1.3k
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Comment: Comment: mas5calls function doesn't work; mirna40cdf problem
15 months ago Guido Hooiveld ★ 3.9k
0
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1
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2.6k
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Comment: Comment: pathview says my nonmodel species is unknown: "species invalid"
15 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.1k
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Answer: Answer: Is ther an annotation package for sheep (Ovis aries)
15 months ago Guido Hooiveld ★ 3.9k
1
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1
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2.1k
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Comment: Comment: MA plot
15 months ago Guido Hooiveld ★ 3.9k
3
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0
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2.1k
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Comment: Comment: MA plot
15 months ago Guido Hooiveld ★ 3.9k
2
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1
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2.1k
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Comment: Comment: MA plot
15 months ago Guido Hooiveld ★ 3.9k
1
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1
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622
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Answer: Answer: select with org.Mm.eg.db does not give ENSEMBL ids
15 months ago Guido Hooiveld ★ 3.9k
0
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0
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2.0k
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Comment: Comment: How can I limit the number of displayed genes in heatplot
16 months ago Guido Hooiveld ★ 3.9k
0
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1
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2.1k
views
Answer: Answer: clusterProfiler - custom annotations
16 months ago Guido Hooiveld ★ 3.9k
0
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2
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2.0k
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Comment: Comment: How can I limit the number of displayed gene sin heatplot
16 months ago Guido Hooiveld ★ 3.9k
0
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0
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806
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Comment: Comment: DGE genes are not available in GSEA
16 months ago Guido Hooiveld ★ 3.9k
0
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0
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3.5k
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Comment: Comment: Error in UseMethod("rescale")
16 months ago Guido Hooiveld ★ 3.9k
1
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1
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2.1k
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Comment: Comment: Implementation of the "original" GSEA algorithm in R
16 months ago Guido Hooiveld ★ 3.9k
0
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1
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3.2k
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Comment: Comment: KEGG enrichment analysis for non model organism
17 months ago Guido Hooiveld ★ 3.9k
0
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1
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3.2k
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Comment: Comment: KEGG enrichment analysis for non model organism
17 months ago Guido Hooiveld ★ 3.9k
0
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0
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1.2k
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Comment: Comment: Questions about non-model organisms gene enrichment analysis
17 months ago Guido Hooiveld ★ 3.9k
0
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0
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1.5k
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Comment: Comment: Adding geneID to list of gene locus IDs
17 months ago Guido Hooiveld ★ 3.9k
1
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1
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1.5k
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Answer: Answer: Adding geneID to list of gene locus IDs
17 months ago Guido Hooiveld ★ 3.9k
0
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0
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820
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Comment: Comment: Error installing Bioc
18 months ago Guido Hooiveld ★ 3.9k
0
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1
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820
views
Comment: Comment: Error installing Bioc
18 months ago Guido Hooiveld ★ 3.9k
680 results • Page 2 of 14
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