User: shangguandong1996

Reputation:
0
Status:
New User
Last seen:
5 days, 14 hours ago
Joined:
2 months, 1 week ago
Email:
s****************@163.com

Profile information, website and location are not shown for new users.

This helps us discourage the inappropriate use of our site.

Posts by shangguandong1996

<prev • 5 results • page 1 of 1 • next >
0
votes
0
answers
100
views
0
answers
Comment: C: A Problem about seqnames() in GenomicRanges
... Cool! It does work! ``` > Sys.setlocale("LC_ALL","C") [1] "C" > library(GenomicRanges) > gr1 <- GRanges( + seqnames = "chr2", + ranges = IRanges(103, 106), + strand = "+", + score = 5L, GC = 0.45) > gr2 <- GRanges( + seqnames = c("chr1", "chr1"), + ra ...
written 8 weeks ago by shangguandong19960
0
votes
0
answers
100
views
0
answers
Comment: C: A Problem about seqnames() in GenomicRanges
... But I still get ``` > library(GenomicRanges) Loading required package: stats4 Loading required package: BiocGenerics Loading required package: parallel Attaching package: ‘BiocGenerics’ The following objects are masked from ‘package:parallel’: clusterApply, clusterApplyLB, clusterCall, clu ...
written 9 weeks ago by shangguandong19960
0
votes
0
answers
100
views
0
answers
Comment: C: A Problem about seqnames() in GenomicRanges
... Thanks for your reply. Here is my `BiocManager::valid()` result ``` > BiocManager::valid() * sessionInfo() R version 3.6.0 (2019-04-26) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 18362) Matrix products: default locale: [1] LC_COLLATE=Chinese (Simplified)_C ...
written 9 weeks ago by shangguandong19960
0
votes
0
answers
100
views
0
answers
A Problem about seqnames() in GenomicRanges
... I come up with a problem when I run the function in the "An Introduction to the GenomicRanges Package"。 ``` > library(GenomicRanges) > gr1 <- GRanges( + seqnames = "chr2", + ranges = IRanges(103, 106), + strand = "+", + score = 5L, GC = 0.45) > gr2 <- GRanges( + seqnames = c ...
genomicranges written 9 weeks ago by shangguandong19960
0
votes
1
answer
68
views
1
answer
I am wondering whether Gviz can plot thin box(noncoding part) directly from GRange
... Hi Dr.Ivanek.I want to plot a Gene structure using GeneRegionTrack and I use the script and test gtf below.I can not plot the noncoding part(5UTR,3UTR).But I make it using the Txdb.In the Gviz Vignettes, I find the below sentence: A nice bonus when building GeneRegionTracks from TxDb objects is tha ...
gviz written 9 weeks ago by shangguandong19960 • updated 9 weeks ago by Robert Ivanek650

Latest awards to shangguandong1996

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 325 users visited in the last hour