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Comment: C: Rsubread: change in behavior when accepting mixed paired end and single end file
5.4 years ago Wei Shi ★ 3.6k
2
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2.5k
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Answer: A: Rsubread: change in behavior when accepting mixed paired end and single end file
5.4 years ago Wei Shi ★ 3.6k
0
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1
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2.5k
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Comment: C: Rsubread: change in behavior when accepting mixed paired end and single end file
5.4 years ago Wei Shi ★ 3.6k
0
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1
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2.5k
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Comment: C: Rsubread: change in behavior when accepting mixed paired end and single end file
5.4 years ago Wei Shi ★ 3.6k
2
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1
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4.4k
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Answer: A: Unassigned reads in Rsubread FeatureCounts
5.5 years ago Wei Shi ★ 3.6k
1
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1
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2.5k
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Answer: A: Rsubread buildindex error
5.6 years ago Wei Shi ★ 3.6k
0
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1
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1.9k
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Comment: C: segfault "memory not mapped" using align from Rsubread
5.6 years ago Wei Shi ★ 3.6k
0
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0
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915
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Answer: A: Rsubread: using shared memory for index while aligning with forked processes
updated 5.9 years ago by 53k • written 5.9 years ago by ★ 3.6k
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7.0k
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Comment: C: featureCounts creating fragments and high NoFeatures value
5.9 years ago Wei Shi ★ 3.6k
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0
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3.7k
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Comment: C: featureCount error - cannot identify gene_id
6.0 years ago Wei Shi ★ 3.6k
0
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1
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2.3k
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Comment: C: Error using Rsubread align: caugh segfault invalid permissions
6.0 years ago Wei Shi ★ 3.6k
1
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0
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1.2k
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Answer: A: Replicating bowtie2 alignment parameters with Rsubread
6.1 years ago Wei Shi ★ 3.6k
1
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0
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1.4k
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Answer: C: Rsubread CIGAR output M only?
6.1 years ago Wei Shi ★ 3.6k
2
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1
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2.9k
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Answer: A: "ERROR: cannot create temp file" when using buildindex from Rsubread
6.1 years ago Wei Shi ★ 3.6k
0
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0
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4.6k
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Answer: A: Collecting unmapped RNA-seq reads
6.2 years ago Wei Shi ★ 3.6k
3
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1
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3.7k
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Answer: A: the coordinates of exons of RefSeq or ENSEMBL genes
6.3 years ago Wei Shi ★ 3.6k
0
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0
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1.5k
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Answer: A: Problem in featureCounts file.
6.3 years ago Wei Shi ★ 3.6k
0
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0
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5.5k
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Comment: C: Error while using buildindex for human genome
6.3 years ago Wei Shi ★ 3.6k
1
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0
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5.5k
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Answer: A: Rsubread, Error in featureCounts paired end
6.3 years ago Wei Shi ★ 3.6k
1
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1
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3.9k
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Answer: A: Can't run with gff3 file
6.4 years ago Wei Shi ★ 3.6k
0
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0
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1.8k
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Answer: A: Killed 9 on macOS Mojave for Rsubread buildindex
6.4 years ago Wei Shi ★ 3.6k
1
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1
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1.8k
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Answer: A: Killed 9 on macOS Mojave for Rsubread buildindex
6.4 years ago Wei Shi ★ 3.6k
0
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0
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1.3k
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Comment: C: Is possible to use NOISeq with counts from RSubread?
6.4 years ago Wei Shi ★ 3.6k
1
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0
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2.2k
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Answer: A: Boxplot function not showing all reads length on x-axis
6.5 years ago Wei Shi ★ 3.6k
1
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1
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2.2k
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Comment: C: Boxplot function not showing all reads length on x-axis
6.5 years ago Wei Shi ★ 3.6k
0
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1
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1.8k
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Answer: A: How to read Illumina data used in the MACQ project (GSE5350)
updated 6.5 years ago by 53k • written 6.5 years ago by ★ 3.6k
3
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1
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5.4k
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Answer: A: FeatureCounts counts wrongly when quantifying mixed paired and unpaired reads
6.6 years ago Wei Shi ★ 3.6k
2
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1
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2.1k
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Answer: A: Improving the performance of the align function from Rsubread for old Roche454 r
6.6 years ago Wei Shi ★ 3.6k
0
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1
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5.4k
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Comment: C: FeatureCounts counts wrongly when quantifying mixed paired and unpaired reads
6.6 years ago Wei Shi ★ 3.6k
2
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1
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5.2k
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Answer: A: featureCounts from RnaSeqGeneEdgeRQL returning a matrix of counts full of 0...
6.6 years ago Wei Shi ★ 3.6k
0
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0
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4.2k
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Answer: A: featureCounts for ATAC-seq
6.6 years ago Wei Shi ★ 3.6k
1
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0
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2.7k
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Comment: C: featurecounts Rsubread ERROR on exon_id
6.6 years ago Wei Shi ★ 3.6k
0
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1
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2.7k
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Comment: C: featurecounts Rsubread ERROR on exon_id
6.6 years ago Wei Shi ★ 3.6k
1
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1
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2.7k
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Answer: A: featurecounts Rsubread ERROR on exon_id
6.6 years ago Wei Shi ★ 3.6k
2
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1
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3.0k
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Answer: A: The optimal minMQS parameter in featureCounts for RNA-Seq quantification
6.8 years ago Wei Shi ★ 3.6k
2
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0
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2.7k
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Answer: A: How to change stringtie gene_id names with ref_gene_id when performing featureCo
6.8 years ago Wei Shi ★ 3.6k
0
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1
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4.0k
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Comment: C: Rsubread- feature counts
6.8 years ago Wei Shi ★ 3.6k
2
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1
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4.0k
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Answer: C: Rsubread- feature counts
6.8 years ago Wei Shi ★ 3.6k
0
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2
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3.7k
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Comment: C: mapping FASTQ files to single gene (fluorescent reporter)
7.0 years ago Wei Shi ★ 3.6k
0
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1
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3.7k
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Comment: C: mapping FASTQ files to single gene (fluorescent reporter)
7.0 years ago Wei Shi ★ 3.6k
0
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1
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4.1k
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Comment: C: Featurecounts issue for counting exons: Not matching total counts mapped for spe
7.0 years ago Wei Shi ★ 3.6k
0
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4
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4.1k
views
Answer: A: Featurecounts issue for counting exons: Not matching total counts mapped for spe
7.0 years ago Wei Shi ★ 3.6k
0
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1
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5.5k
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Comment: C: Error while using buildindex for human genome
7.0 years ago Wei Shi ★ 3.6k
1
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0
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1.6k
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Answer: A: Rsubread for microbiome data analysis: genome >4GB
7.0 years ago Wei Shi ★ 3.6k
0
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1
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5.5k
views
Comment: C: Error while using buildindex for human genome
7.0 years ago Wei Shi ★ 3.6k
0
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1
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5.5k
views
Comment: C: Error while using buildindex for human genome
7.1 years ago Wei Shi ★ 3.6k
0
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1
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5.5k
views
Comment: C: Error while using buildindex for human genome
7.1 years ago Wei Shi ★ 3.6k
0
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1
reply
5.5k
views
Comment: C: Error while using buildindex for human genome
7.1 years ago Wei Shi ★ 3.6k
0
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1
reply
5.5k
views
Comment: C: Error while using buildindex for human genome
7.1 years ago Wei Shi ★ 3.6k
0
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1
reply
5.5k
views
Comment: C: Error while using buildindex for human genome
7.1 years ago Wei Shi ★ 3.6k
448 results • Page 2 of 9
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