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Comment: C: Rsubread: change in behavior when accepting mixed paired end and single end file
4.5 years ago Wei Shi ★ 3.6k
0
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1
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1.9k
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Comment: C: Rsubread: change in behavior when accepting mixed paired end and single end file
4.5 years ago Wei Shi ★ 3.6k
2
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1
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3.6k
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Answer: A: Unassigned reads in Rsubread FeatureCounts
4.6 years ago Wei Shi ★ 3.6k
1
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1
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2.2k
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Answer: A: Rsubread buildindex error
4.7 years ago Wei Shi ★ 3.6k
0
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1
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1.6k
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Comment: C: segfault "memory not mapped" using align from Rsubread
4.7 years ago Wei Shi ★ 3.6k
0
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0
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784
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Answer: A: Rsubread: using shared memory for index while aligning with forked processes
updated 5.0 years ago by 52k • written 5.0 years ago by ★ 3.6k
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6.1k
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Comment: C: featureCounts creating fragments and high NoFeatures value
5.0 years ago Wei Shi ★ 3.6k
0
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0
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3.1k
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Comment: C: featureCount error - cannot identify gene_id
5.0 years ago Wei Shi ★ 3.6k
0
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1
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2.0k
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Comment: C: Error using Rsubread align: caugh segfault invalid permissions
5.1 years ago Wei Shi ★ 3.6k
1
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0
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1.0k
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Answer: A: Replicating bowtie2 alignment parameters with Rsubread
5.2 years ago Wei Shi ★ 3.6k
1
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0
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1.1k
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Answer: C: Rsubread CIGAR output M only?
5.2 years ago Wei Shi ★ 3.6k
2
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1
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2.6k
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Answer: A: "ERROR: cannot create temp file" when using buildindex from Rsubread
5.2 years ago Wei Shi ★ 3.6k
0
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0
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3.8k
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Answer: A: Collecting unmapped RNA-seq reads
5.3 years ago Wei Shi ★ 3.6k
3
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1
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3.1k
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Answer: A: the coordinates of exons of RefSeq or ENSEMBL genes
5.4 years ago Wei Shi ★ 3.6k
0
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0
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1.2k
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Answer: A: Problem in featureCounts file.
5.4 years ago Wei Shi ★ 3.6k
0
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0
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4.8k
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Comment: C: Error while using buildindex for human genome
5.4 years ago Wei Shi ★ 3.6k
1
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0
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4.9k
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Answer: A: Rsubread, Error in featureCounts paired end
5.4 years ago Wei Shi ★ 3.6k
1
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1
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3.3k
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Answer: A: Can't run with gff3 file
5.4 years ago Wei Shi ★ 3.6k
0
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0
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1.6k
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Answer: A: Killed 9 on macOS Mojave for Rsubread buildindex
5.5 years ago Wei Shi ★ 3.6k
1
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1
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1.6k
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Answer: A: Killed 9 on macOS Mojave for Rsubread buildindex
5.5 years ago Wei Shi ★ 3.6k
0
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0
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1.0k
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Comment: C: Is possible to use NOISeq with counts from RSubread?
5.5 years ago Wei Shi ★ 3.6k
1
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0
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1.8k
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Answer: A: Boxplot function not showing all reads length on x-axis
5.5 years ago Wei Shi ★ 3.6k
1
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1
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1.8k
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Comment: C: Boxplot function not showing all reads length on x-axis
5.5 years ago Wei Shi ★ 3.6k
0
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1
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1.5k
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Answer: A: How to read Illumina data used in the MACQ project (GSE5350)
updated 5.6 years ago by 52k • written 5.6 years ago by ★ 3.6k
3
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1
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4.5k
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Answer: A: FeatureCounts counts wrongly when quantifying mixed paired and unpaired reads
5.6 years ago Wei Shi ★ 3.6k
2
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1
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1.7k
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Answer: A: Improving the performance of the align function from Rsubread for old Roche454 r
5.6 years ago Wei Shi ★ 3.6k
0
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1
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4.5k
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Comment: C: FeatureCounts counts wrongly when quantifying mixed paired and unpaired reads
5.6 years ago Wei Shi ★ 3.6k
2
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1
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4.5k
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Answer: A: featureCounts from RnaSeqGeneEdgeRQL returning a matrix of counts full of 0...
5.7 years ago Wei Shi ★ 3.6k
0
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0
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3.5k
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Answer: A: featureCounts for ATAC-seq
5.7 years ago Wei Shi ★ 3.6k
1
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0
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2.3k
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Comment: C: featurecounts Rsubread ERROR on exon_id
5.7 years ago Wei Shi ★ 3.6k
0
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1
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2.3k
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Comment: C: featurecounts Rsubread ERROR on exon_id
5.7 years ago Wei Shi ★ 3.6k
1
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1
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2.3k
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Answer: A: featurecounts Rsubread ERROR on exon_id
5.7 years ago Wei Shi ★ 3.6k
2
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1
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2.5k
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Answer: A: The optimal minMQS parameter in featureCounts for RNA-Seq quantification
5.9 years ago Wei Shi ★ 3.6k
2
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0
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2.2k
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Answer: A: How to change stringtie gene_id names with ref_gene_id when performing featureCo
5.9 years ago Wei Shi ★ 3.6k
0
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1
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3.4k
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Comment: C: Rsubread- feature counts
5.9 years ago Wei Shi ★ 3.6k
2
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1
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3.4k
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Answer: C: Rsubread- feature counts
5.9 years ago Wei Shi ★ 3.6k
0
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2
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3.0k
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Comment: C: mapping FASTQ files to single gene (fluorescent reporter)
6.0 years ago Wei Shi ★ 3.6k
0
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1
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3.0k
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Comment: C: mapping FASTQ files to single gene (fluorescent reporter)
6.0 years ago Wei Shi ★ 3.6k
0
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1
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3.4k
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Comment: C: Featurecounts issue for counting exons: Not matching total counts mapped for spe
6.0 years ago Wei Shi ★ 3.6k
0
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4
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3.4k
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Answer: A: Featurecounts issue for counting exons: Not matching total counts mapped for spe
6.0 years ago Wei Shi ★ 3.6k
0
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1
reply
4.8k
views
Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
1
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0
replies
1.3k
views
Answer: A: Rsubread for microbiome data analysis: genome >4GB
6.1 years ago Wei Shi ★ 3.6k
0
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1
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4.8k
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Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
0
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1
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4.8k
views
Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
0
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1
reply
4.8k
views
Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
0
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1
reply
4.8k
views
Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
0
votes
1
reply
4.8k
views
Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
0
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1
reply
4.8k
views
Comment: C: Error while using buildindex for human genome
6.1 years ago Wei Shi ★ 3.6k
0
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1
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1.8k
views
Comment: C: Options Request for FeatureCounts
6.2 years ago Wei Shi ★ 3.6k
0
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1
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1.8k
views
Comment: C: Options Request for FeatureCounts
6.3 years ago Wei Shi ★ 3.6k
446 results • Page 2 of 9
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