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0
votes
1
reply
1.8k
views
Answer:
A: Options Request for FeatureCounts
6.3 years ago
Wei Shi
★ 3.6k
2
votes
1
reply
1.7k
views
Answer:
A: Perfectly aligning sequences not mapping to worm genome in Subread's featureCoun
6.3 years ago
Wei Shi
★ 3.6k
3
votes
1
reply
1.6k
views
Answer:
C: File not found error when using dupRadar::analyzeDuprates
6.4 years ago
Wei Shi
★ 3.6k
1
vote
0
replies
3.4k
views
Answer:
A: Subread FeatureCounts for Exon level quantification: Length estimate for Exons a
6.4 years ago
Wei Shi
★ 3.6k
4
votes
2
replies
5.3k
views
Answer:
A: featureCounts for multiple features
updated 6.4 years ago by
Gordon Smyth
52k • written 6.4 years ago by
Wei Shi
★ 3.6k
0
votes
0
replies
2.2k
views
Comment:
C: Rsubread Installation error
6.4 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
3.1k
views
Comment:
C: read count summed over exons is greater tham the gene-level read count using fea
6.5 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
1.3k
views
Answer:
A: Is circular RNA read out as linear fragments during Rsubread-DESeq2
updated 6.5 years ago by
Gordon Smyth
52k • written 6.5 years ago by
Wei Shi
★ 3.6k
0
votes
0
replies
3.9k
views
Comment:
C: featureCounts Returns 0.0% successfully assigned fragments
6.5 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
3.9k
views
Comment:
C: featureCounts Returns 0.0% successfully assigned fragments
6.5 years ago
Wei Shi
★ 3.6k
0
votes
2
replies
3.9k
views
Comment:
C: featureCounts Returns 0.0% successfully assigned fragments
6.5 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
3.9k
views
Comment:
C: featureCounts Returns 0.0% successfully assigned fragments
6.5 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
3.3k
views
Comment:
C: Rsubread install fails, "unable to load shared object Rsubread.so"
6.6 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
3.5k
views
Answer:
A: lncRNA annotation for featureCouns and STAR
6.6 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
3.3k
views
Comment:
C: Rsubread install fails, "unable to load shared object Rsubread.so"
6.6 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
6.9k
views
Comment:
C: strange results with featureCounts
6.6 years ago
Wei Shi
★ 3.6k
0
votes
2
replies
3.3k
views
Comment:
C: Rsubread install fails, "unable to load shared object Rsubread.so"
6.6 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
6.9k
views
Comment:
C: strange results with featureCounts
6.6 years ago
Wei Shi
★ 3.6k
3
votes
1
reply
6.9k
views
Answer:
A: strange results with featureCounts
6.6 years ago
Wei Shi
★ 3.6k
1
vote
1
reply
2.2k
views
Comment:
C: Rsubread Installation error
6.7 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
3.8k
views
Comment:
C: featureCounts taking 4-10 hours per BAM file?
6.7 years ago
Wei Shi
★ 3.6k
1
vote
1
reply
5.2k
views
Comment:
C: Create count matrix with featureCounts for stranded as well as reversely strande
6.7 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
3.0k
views
Comment:
C: nthreads option does NOT work in rsubread featureCounts
6.7 years ago
Wei Shi
★ 3.6k
4
votes
2
replies
5.2k
views
Answer:
A: Create count matrix with featureCounts for stranded as well as reversely strande
6.7 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
2.2k
views
Answer:
A: Rsubread Installation error
6.7 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.8k
views
Answer:
A: problem of getting count matrix in featurecounts of Rsubread package
updated 6.8 years ago by
Gordon Smyth
52k • written 6.8 years ago by
Wei Shi
★ 3.6k
0
votes
0
replies
1.5k
views
Comment:
C: Rsubread Read Bam and filter reads by TAG field
6.9 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: caught segfault when using featureCounts
6.9 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: caught segfault when using featureCounts
6.9 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
2.7k
views
Comment:
C: caught segfault when using featureCounts
7.0 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: caught segfault when using featureCounts
7.0 years ago
Wei Shi
★ 3.6k
1
vote
1
reply
6.2k
views
Answer:
A: Rsubread counting peaks ATACseq
7.1 years ago
Wei Shi
★ 3.6k
3
votes
0
replies
2.8k
views
Answer:
A: Explainnation of featureCounts in-built annotation?
7.1 years ago
Wei Shi
★ 3.6k
1
vote
0
replies
2.4k
views
Job:
Bioinformatics postdoc in Shi Lab at the Walter and Eliza Hall Institute, Melbourne, Australia
bioinformatician job
postdoc
Job
7.2 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
828
views
Comment:
C: Feature Count annotation file problem
7.2 years ago
Wei Shi
★ 3.6k
3
votes
2
replies
3.0k
views
Answer:
A: nthreads option does NOT work in rsubread featureCounts
updated 7.3 years ago by
Gordon Smyth
52k • written 7.3 years ago by
Wei Shi
★ 3.6k
1
vote
0
replies
2.8k
views
Answer:
A: Install Rsubread in win10, failed, how to proceed?
7.5 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
3.1k
views
Answer:
A: read count summed over exons is greater tham the gene-level read count using fea
7.5 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.7k
views
Comment:
C: problem running featurecounts using hg38 in-built annotation
7.6 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.8k
views
Answer:
A: Using Rsubread with FASTA sequence files over 4 GB
7.6 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.9k
views
Comment:
C: Rsubread crash on Mac during alignment
7.6 years ago
Wei Shi
★ 3.6k
0
votes
2
replies
2.6k
views
Comment:
C: FeatureCounts output to SAM like htseq-counts?
7.6 years ago
Wei Shi
★ 3.6k
3
votes
1
reply
2.7k
views
Answer:
A: Reads mistakenly being assigned to Unassigned_NoFeatures category when using fea
7.6 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.6k
views
Comment:
C: FeatureCounts --read2pos option
7.7 years ago
Wei Shi
★ 3.6k
0
votes
1
reply
1.6k
views
Answer:
A: FeatureCounts --read2pos option
7.7 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.9k
views
Answer:
A: Rsubread crash on Mac during alignment
7.8 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.4k
views
Comment:
C: % of assigned reads using Rsubread featureCounts useMetaFeatures
7.8 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
1.9k
views
Comment:
C: Rsubread crash on Mac during alignment
7.9 years ago
Wei Shi
★ 3.6k
0
votes
0
replies
6.1k
views
Comment:
C: featureCounts creating fragments and high NoFeatures value
7.9 years ago
Wei Shi
★ 3.6k
0
votes
2
replies
6.1k
views
Answer:
A: featureCounts creating fragments and high NoFeatures value
7.9 years ago
Wei Shi
★ 3.6k
446 results • Page
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