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Comment: C: featureCounts segfault
11.5 years ago Wei Shi ★ 3.6k
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Answer: A: featureCounts segfault
11.5 years ago Wei Shi ★ 3.6k
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Comment: C: Feature request for Rsubread::featureCounts: read length adjustment
11.6 years ago Wei Shi ★ 3.6k
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Comment: C: Feature request for Rsubread::featureCounts: read length adjustment
11.6 years ago Wei Shi ★ 3.6k
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Comment: C: Feature request for Rsubread::featureCounts: read length adjustment
11.6 years ago Wei Shi ★ 3.6k
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2.4k
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Comment: C: Feature request for Rsubread::featureCounts: read length adjustment
11.6 years ago Wei Shi ★ 3.6k
0
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2.4k
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Answer: A: Feature request for Rsubread::featureCounts: read length adjustment
11.6 years ago Wei Shi ★ 3.6k
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Feature request for Rsubread::featureCounts: read length adjustment
updated 11.6 years ago by ★ 7.9k • written 11.6 years ago by ★ 3.6k
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Answer: A: Computing normalized counts for exons in edgeR
11.7 years ago Wei Shi ★ 3.6k
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Answer: A: Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
12.0 years ago Wei Shi ★ 3.6k
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Answer: A: Complete variant toolbox: gmapR/VariantTools/VariantAnnotation
12.0 years ago Wei Shi ★ 3.6k
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3.0k
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Comment: C: Rsubread : featureCounts PEReadsReordering=TRUE deletes unpaired reads?
12.0 years ago Wei Shi ★ 3.6k
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Comment: C: Rsubread : featureCounts PEReadsReordering=TRUE deletes unpaired reads?
12.0 years ago Wei Shi ★ 3.6k
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3.0k
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Answer: A: Rsubread : featureCounts PEReadsReordering=TRUE deletes unpaired reads?
12.0 years ago Wei Shi ★ 3.6k
0
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1
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1.4k
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Answer: A: Rsubread featureCounts question
12.1 years ago Wei Shi ★ 3.6k
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Answer: A: Rsubread featureCounts question
12.1 years ago Wei Shi ★ 3.6k
0
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1
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1.9k
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Answer: A: limma_3.17.23 - missing ILMN identifiers in EList objects after read.ilmn
12.1 years ago Wei Shi ★ 3.6k
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961
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Answer: A: Hello
12.2 years ago Wei Shi ★ 3.6k
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Answer: A: Illumina based one color microarray data analysis
12.2 years ago Wei Shi ★ 3.6k
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1.3k
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Answer: A: Illumina based one color microarray data analysis
12.2 years ago Wei Shi ★ 3.6k
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1.6k
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Answer: A: Rsubread for paired end SOLID sequencing
12.2 years ago Wei Shi ★ 3.6k
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2.2k
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Answer: A: Reading Illumina data from GenomeStudio in limma
12.3 years ago Wei Shi ★ 3.6k
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2.2k
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Answer: A: Reading Illumina data from GenomeStudio in limma
12.3 years ago Wei Shi ★ 3.6k
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2.2k
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Comment: C: Rsubread - featureCounts for extracting read counts from De novo assembled trans
12.3 years ago Wei Shi ★ 3.6k
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Rsubread - featureCounts for extracting read counts from De novo assembled transcripts - EdgeR DE analysis
Annotation GO BSgenome cdf BSgenome Rsubread Annotation GO BSgenome cdf BSgenome
12.3 years ago Wei Shi ★ 3.6k
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Answer: A: Rsubread - featureCounts for extracting read counts from De novo assembled trans
12.3 years ago Wei Shi ★ 3.6k
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0
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1.5k
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Rsubread - featureCounts for extracting read counts from De novo assembled transcripts
Annotation GO BSgenome cdf BSgenome Rsubread Annotation GO BSgenome cdf BSgenome
12.3 years ago Wei Shi ★ 3.6k
0
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1.6k
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Comment: C: Rsubread for paired end SOLID sequencing
12.3 years ago Wei Shi ★ 3.6k
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1
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1.6k
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Answer: A: Rsubread for paired end SOLID sequencing
12.3 years ago Wei Shi ★ 3.6k
0
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1
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2.0k
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Comment: C: Illumina Probe_ID used in the LIMMA package for neqc function
12.4 years ago Wei Shi ★ 3.6k
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1
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2.0k
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Comment: C: Illumina Probe_ID used in the LIMMA package for neqc function
12.4 years ago Wei Shi ★ 3.6k
0
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5
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2.0k
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Illumina Probe_ID used in the LIMMA package for neqc function
Microarray Annotation Normalization Clustering probe limma Microarray Annotation probe
updated 12.4 years ago by ▴ 40 • written 12.4 years ago by ★ 3.6k
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featureCounts read summarization function
Sequencing Annotation Rsubread Sequencing Annotation Rsubread
12.4 years ago Wei Shi ★ 3.6k
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1
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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
12.4 years ago Wei Shi ★ 3.6k
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1.9k
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Answer: A: read.ilmn() and variation between chips
12.4 years ago Wei Shi ★ 3.6k
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3.5k
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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
12.4 years ago Wei Shi ★ 3.6k
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2.4k
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Answer: A: Illumina Probe_ID used in the LIMMA package for neqc function
12.4 years ago Wei Shi ★ 3.6k
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1
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3.5k
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Comment: C: IlluminaHumanMethylation450k.db: Missing probes in IlluminaHumanMethylation450kP
12.4 years ago Wei Shi ★ 3.6k
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0
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1.0k
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Answer: A: using beadarray or limma without spatial information
12.5 years ago Wei Shi ★ 3.6k
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0
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1.2k
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Answer: A: loss of stranding in alignments from recent versions of Rsubread
12.6 years ago Wei Shi ★ 3.6k
0
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0
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1.6k
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mapping multi-mapping reads in Rsubread (summarizeOverlaps mode ignoring inter feature overlaps)
Annotation Rsamtools Rsubread Annotation Rsamtools Rsubread
12.6 years ago Wei Shi ★ 3.6k
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Comment: C: summarizeOverlaps mode ignoring inter feature overlaps
12.6 years ago Wei Shi ★ 3.6k
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1
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4.0k
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Comment: C: summarizeOverlaps mode ignoring inter feature overlaps
12.6 years ago Wei Shi ★ 3.6k
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1
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4.0k
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Comment: C: summarizeOverlaps mode ignoring inter feature overlaps
12.6 years ago Wei Shi ★ 3.6k
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Answer: A: need help for the study design of a RNA-Seq project
12.6 years ago Wei Shi ★ 3.6k
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4.0k
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Comment: C: summarizeOverlaps mode ignoring inter feature overlaps
12.6 years ago Wei Shi ★ 3.6k
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4.0k
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Comment: C: summarizeOverlaps mode ignoring inter feature overlaps
12.6 years ago Wei Shi ★ 3.6k
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4.4k
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Answer: A: Bioconductor 2.12 is released
12.6 years ago Wei Shi ★ 3.6k
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1.3k
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Comment: C: beyond gene differential expression
12.6 years ago Wei Shi ★ 3.6k
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3.8k
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Answer: A: Aligning short reads to a single gene
12.8 years ago Wei Shi ★ 3.6k
448 results • Page 6 of 9
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