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2
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5.8k
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Comment:
Comment: GSVA Error in .mapGeneSetsToFeatures(mapped.gset.idx.list, rownames(expr))
3.3 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
1.9k
views
Comment:
Comment: Selecting or not selecting samples before running GSVA
3.4 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
1.4k
views
Comment:
Comment: GSVA on gene sets with 2 genes
3.6 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
1.6k
views
Comment:
C: Error in GSVA: Error in dimnames(x) <- dn
3.6 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
1.6k
views
Comment:
C: Error in GSVA: Error in dimnames(x) <- dn
3.6 years ago
Robert Castelo
★ 3.3k
3
votes
2
replies
3.2k
views
Comment:
C: Pipeline to analyzing Microarray data set( GSE files from NCBI GEO)
3.9 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
3.7k
views
Comment:
C: How to compare two or more GSVA outputs, when it is not possible to run GSVA at
3.9 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
3.7k
views
Comment:
C: How to compare two or more GSVA outputs, when it is not possible to run GSVA at
3.9 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
3.7k
views
Comment:
C: How to compare two or more GSVA outputs, when it is not possible to run GSVA at
3.9 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
3.7k
views
Comment:
C: How to compare two or more GSVA outputs, when it is not possible to run GSVA at
3.9 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.0k
views
Comment:
C: Bioconductor vs BioConductor
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.0k
views
Comment:
C: Bioconductor vs BioConductor
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.4k
views
Comment:
C: GSVA (running group samples separately)
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.4k
views
Comment:
C: GSVA (running group samples separately)
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.4k
views
Comment:
C: GSVA (running group samples separately)
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.4k
views
Comment:
C: GSVA (running group samples separately)
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.4k
views
Comment:
C: GSVA (running group samples separately)
4.0 years ago
Robert Castelo
★ 3.3k
1
vote
0
replies
957
views
Comment:
C: Why BiocManager try to reinstall dependencies already installed?
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.9k
views
Comment:
C: Unassigned reads in Rsubread FeatureCounts
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.4k
views
Comment:
C: Updating Gene Annotation in GeneSetCollection {GSEABase}
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.4k
views
Comment:
C: Updating Gene Annotation in GeneSetCollection {GSEABase}
4.0 years ago
Robert Castelo
★ 3.3k
1
vote
2
replies
2.4k
views
Comment:
C: Updating Gene Annotation in GeneSetCollection {GSEABase}
4.0 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
574
views
Comment:
C: Detection of genes associated with polymorphism
4.1 years ago
Robert Castelo
★ 3.3k
2
votes
0
replies
1.1k
views
Comment:
C: Rsamtools summarizeOverlaps produces low counts
4.1 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
666
views
Comment:
C: GenomicScores cannot find phastCons30way.UCSC.hg38 though package is loaded
4.2 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
1.1k
views
Comment:
C: Information on genomic sequences via Seqinfo failing
4.2 years ago
Robert Castelo
★ 3.3k
1
vote
0
replies
2.6k
views
Comment:
C: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
4.2 years ago
Robert Castelo
★ 3.3k
1
vote
1
reply
2.6k
views
Comment:
C: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
4.2 years ago
Robert Castelo
★ 3.3k
1
vote
1
reply
2.6k
views
Comment:
C: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
4.2 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.6k
views
Comment:
C: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
4.2 years ago
Robert Castelo
★ 3.3k
1
vote
1
reply
2.6k
views
Comment:
C: How to extract phastcons score for all protein coding genes and lncRNAs using Ge
4.2 years ago
Robert Castelo
★ 3.3k
3
votes
1
reply
1.5k
views
Comment:
C: GSEABase - Map gene/transcript IDs to GOslims?
4.2 years ago
Robert Castelo
★ 3.3k
1
vote
0
replies
3.1k
views
Comment:
C: GSEABase - View/extract GO terms mapped to each GOslim
4.2 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.0k
views
Comment:
C: Dealing with duplicated genes in camera gene set testing
4.4 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.0k
views
Comment:
C: Dealing with duplicated genes in camera gene set testing
4.4 years ago
Robert Castelo
★ 3.3k
1
vote
0
replies
3.8k
views
Comment:
C: mm10 phastCons data for use with ATACseqQC
4.4 years ago
Robert Castelo
★ 3.3k
1
vote
1
reply
3.8k
views
Comment:
C: mm10 phastCons data for use with ATACseqQC
4.4 years ago
Robert Castelo
★ 3.3k
1
vote
0
replies
1.4k
views
Comment:
C: SVA for repeated measures design
4.6 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
5.1k
views
Comment:
C: GSVA on RNAseq data
5.1 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
3.1k
views
Comment:
C: Differential expression on GSVA scores using LIMMA
5.1 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
1.1k
views
Comment:
C: Efficient counting of nucleotide changes in short-reads
5.4 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.0k
views
Comment:
C: Meaning of zero for ssGESA value calculated by GSVA package
5.8 years ago
Robert Castelo
★ 3.3k
1
vote
1
reply
6.6k
views
Comment:
C: Pre-processing RNA-seq data (normalization and transformation) for GSVA
5.9 years ago
Robert Castelo
★ 3.3k
2
votes
1
reply
6.6k
views
Comment:
C: Pre-processing RNA-seq data (normalization and transformation) for GSVA
5.9 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
1.9k
views
Comment:
C: Annotating Expression Set for GSVA w/ Brainarray Human Gene 1.1 ST Array CDF
5.9 years ago
Robert Castelo
★ 3.3k
1
vote
1
reply
6.6k
views
Comment:
C: Pre-processing RNA-seq data (normalization and transformation) for GSVA
5.9 years ago
Robert Castelo
★ 3.3k
0
votes
0
replies
2.5k
views
Comment:
C: Problem using GOTERM[["x"]] from GO.db
6.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.5k
views
Comment:
C: Problem using GOTERM[["x"]] from GO.db
6.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.5k
views
Comment:
C: Problem using GOTERM[["x"]] from GO.db
6.0 years ago
Robert Castelo
★ 3.3k
0
votes
1
reply
2.5k
views
Comment:
C: Problem using GOTERM[["x"]] from GO.db
6.0 years ago
Robert Castelo
★ 3.3k
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