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2
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0
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772
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
4 days ago Robert Castelo ★ 3.3k
2
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1
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772
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
4 days ago Robert Castelo ★ 3.3k
2
votes
1
reply
772
views
Comment: Comment: Why p value inconsistent when using different number of pathway score?
5 days ago Robert Castelo ★ 3.3k
1
vote
1
reply
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
5 days ago Robert Castelo ★ 3.3k
1
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1
reply
389
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Answer: Answer: GSVA error
10 days ago Robert Castelo ★ 3.3k
1
vote
0
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852
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Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
14 days ago Robert Castelo ★ 3.3k
0
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1
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852
views
Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
14 days ago Robert Castelo ★ 3.3k
1
vote
1
reply
852
views
Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
14 days ago Robert Castelo ★ 3.3k
1
vote
1
reply
852
views
Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
14 days ago Robert Castelo ★ 3.3k
0
votes
1
reply
201
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Answer: Answer: Storing directories inside an ExperimentHub package?
14 days ago Robert Castelo ★ 3.3k
1
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1
reply
852
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Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
14 days ago Robert Castelo ★ 3.3k
1
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0
replies
460
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Comment: Comment: GSVA on separate healthy and disease datasets
15 days ago Robert Castelo ★ 3.3k
0
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1
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460
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Answer: Answer: GSVA on separate healthy and disease datasets
16 days ago Robert Castelo ★ 3.3k
1
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1
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350
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Comment: Comment: How to make boxplot with pairwise and overall p value from Limma
17 days ago Robert Castelo ★ 3.3k
0
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1
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406
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Comment: Comment: Obtaining pheno data from CEL files
17 days ago Robert Castelo ★ 3.3k
2
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2
replies
1.8k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
23 days ago Robert Castelo ★ 3.3k
1
vote
1
reply
687
views
Comment: Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
29 days ago Robert Castelo ★ 3.3k
1
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0
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281
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Answer: Answer: Impute does not work
8 weeks ago Robert Castelo ★ 3.3k
0
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1
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158
views
error with spatialDE::run() and basilisk i/f
basilisk spatialDE
updated 10 weeks ago by 65k • written 10 weeks ago by ★ 3.3k
2
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0
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662
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Comment: Comment: outdated GEOmetadb.sqlite
3 months ago Robert Castelo ★ 3.3k
0
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0
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519
views
Answer: Answer: Unexpected results for a differential expression analysis between males and fema
4 months ago Robert Castelo ★ 3.3k
0
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0
replies
362
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Comment: Comment: Obtaining rsIDs with ENSG and variant ID information
4 months ago Robert Castelo ★ 3.3k
0
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1
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362
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Answer: Answer: Obtaining rsIDs with ENSG and variant ID information
4 months ago Robert Castelo ★ 3.3k
1
vote
0
replies
597
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Answer: Answer: How should I run ssGSEA Hallmark Enrichment Analysis?
4 months ago Robert Castelo ★ 3.3k
0
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0
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392
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Answer: Answer: GSVA exceeds 1
7 months ago Robert Castelo ★ 3.3k
3
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0
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1.2k
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Answer: Answer: Gene set analysis: GSVA, Z-Score, and fold-changes
9 months ago Robert Castelo ★ 3.3k
0
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0
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346
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Answer: Answer: VariantFiltering error
10 months ago Robert Castelo ★ 3.3k
0
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1
reply
779
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Answer: Answer: GSVA with and without absolute scaling method
12 months ago Robert Castelo ★ 3.3k
5
votes
2
replies
662
views
outdated GEOmetadb.sqlite
GEOmetadb
14 months ago • updated 3 months ago Robert Castelo ★ 3.3k
0
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0
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724
views
Comment: Comment: GSVA: Error loading interactive web app
14 months ago Robert Castelo ★ 3.3k
0
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0
replies
786
views
Comment: Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
14 months ago Robert Castelo ★ 3.3k
0
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1
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724
views
Answer: Answer: GSVA: Error loading interactive web app
14 months ago Robert Castelo ★ 3.3k
0
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0
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786
views
Comment: Comment: Strand information in a GAlignmentsList object derived from strand-specific pair
14 months ago Robert Castelo ★ 3.3k
4
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5
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786
views
Strand information in a GAlignmentsList object derived from strand-specific paired-end RNA-seq data
GenomicAlignments
14 months ago Robert Castelo ★ 3.3k
0
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1
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2.2k
views
Comment: Comment: Atena package - error (new user)
15 months ago Robert Castelo ★ 3.3k
0
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1
reply
2.2k
views
Comment: Comment: Atena package - error (new user)
15 months ago Robert Castelo ★ 3.3k
0
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0
replies
1.0k
views
Comment: Comment: GSVA results interpretation
15 months ago Robert Castelo ★ 3.3k
0
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1
reply
1.0k
views
Answer: Answer: GSVA results interpretation
15 months ago Robert Castelo ★ 3.3k
0
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1
reply
2.2k
views
Comment: Comment: Atena package - error (new user)
16 months ago Robert Castelo ★ 3.3k
0
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0
replies
758
views
Job: Research software engineer at UPF Barcelona
JobPosting Devel GSVA Software
17 months ago Robert Castelo ★ 3.3k
0
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0
replies
1.5k
views
Comment: Comment: 'combined score' calculation with singscore vs gsva
17 months ago Robert Castelo ★ 3.3k
0
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1
reply
1.5k
views
Comment: Comment: 'combined score' calculation with singscore vs gsva
17 months ago Robert Castelo ★ 3.3k
1
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1
reply
1.5k
views
Answer: Answer: 'combined score' calculation with singscore vs gsva
17 months ago Robert Castelo ★ 3.3k
0
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0
replies
1.6k
views
Answer: Answer: Properly constructing a hypergeometric test
18 months ago Robert Castelo ★ 3.3k
0
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0
replies
5.6k
views
Comment: Comment: GSVA Error in .mapGeneSetsToFeatures(mapped.gset.idx.list, rownames(expr))
19 months ago Robert Castelo ★ 3.3k
0
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0
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1.2k
views
Comment: Comment: MafH5.gnomAD.v3.1.2.GRCh38 omitted indels
19 months ago Robert Castelo ★ 3.3k
1
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1
reply
1.8k
views
Comment: Comment: GSVA perfomed on RSEM Expected Count data
21 months ago Robert Castelo ★ 3.3k
1
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2
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1.8k
views
Comment: Comment: GSVA perfomed on RSEM Expected Count data
21 months ago Robert Castelo ★ 3.3k
0
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0
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1.8k
views
Comment: Comment: GSVA perfomed on RSEM Expected Count data
21 months ago Robert Castelo ★ 3.3k
0
votes
1
reply
1.2k
views
Comment: Comment: MafH5.gnomAD.v3.1.2.GRCh38 omitted indels
21 months ago Robert Castelo ★ 3.3k
443 results • Page 1 of 9
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