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Answer: A: Is there any way to set bsseq object as 'smoothed'?
9.6 years ago Kasper Daniel Hansen ★ 6.5k
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5.6k
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Comment: C: Installing MethylationEPIC minifest and annotation
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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1
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2.3k
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Comment: C: bsseq BSmooth error
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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5.6k
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Comment: C: Installing MethylationEPIC minifest and annotation
9.7 years ago Kasper Daniel Hansen ★ 6.5k
1
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0
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3.9k
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Comment: C: How to remove unwanted probes before normalization in 450k data
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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4.7k
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Comment: C: minfi MethylationEPIC errors
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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4.7k
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Comment: C: minfi MethylationEPIC errors
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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1
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4.7k
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Comment: C: minfi MethylationEPIC errors
9.7 years ago Kasper Daniel Hansen ★ 6.5k
1
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2
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4.7k
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Answer: A: minfi MethylationEPIC errors
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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1
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2.1k
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Comment: C: minfi sample limit
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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2.1k
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Answer: A: minfi sample limit
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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1.9k
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Comment: C: Forum: minfi: NA values in RGChannelSet
9.7 years ago Kasper Daniel Hansen ★ 6.5k
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1.9k
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Answer: A: Forum: minfi: NA values in RGChannelSet
9.7 years ago Kasper Daniel Hansen ★ 6.5k
2
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0
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5.5k
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Comment: C: Illumina MethylationEPIC vs. 450K
9.8 years ago Kasper Daniel Hansen ★ 6.5k
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0
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5.5k
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Comment: C: Illumina MethylationEPIC vs. 450K
9.8 years ago Kasper Daniel Hansen ★ 6.5k
1
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1
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4.8k
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Comment: C: t-statistic cutoff for finding DMRs with bsseq
9.8 years ago Kasper Daniel Hansen ★ 6.5k
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0
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1.9k
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Answer: A: Error processing Infinium 450K Methylation data using Minfi
updated 9.9 years ago by ★ 8.2k • written 9.9 years ago by ★ 6.5k
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2
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2.9k
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Answer: A: Error in loading GenomicMethylSet: "no slot of name 'elementMetadata' for this o
updated 10.1 years ago by 25k • written 10.1 years ago by ★ 6.5k
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3
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2.4k
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Minfi "mapToGenome" error when attempting to generate a genomicRatioSet
Cancer convert minfi Cancer convert minfi
updated 10.1 years ago by • 0 • written 11.8 years ago by ★ 6.5k
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1
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4.6k
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Comment: C: Loading beta values into minfi
10.1 years ago Kasper Daniel Hansen ★ 6.5k
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1
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4.6k
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Comment: C: Loading beta values into minfi
10.1 years ago Kasper Daniel Hansen ★ 6.5k
1
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2
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4.6k
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Answer: A: Loading beta values into minfi
10.1 years ago Kasper Daniel Hansen ★ 6.5k
1
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1
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3.1k
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Answer: A: BS-seq differential methylation analysis using continuous variable
10.1 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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2.4k
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Answer: A: Error while smoothing BS-seq data with bsseq
10.2 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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3.7k
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Answer: A: Illumina 450k Manifest: Probes Mapping to Multiple RefGene Groups and Names
10.2 years ago Kasper Daniel Hansen ★ 6.5k
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1
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3.1k
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Comment: C: Usecase_AnnotationHub_GRanges.Rmd, genes = qhs[[1]] can't download UCSC 'refGene
updated 10.2 years ago by 25k • written 10.2 years ago by ★ 6.5k
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0
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3.1k
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Comment: C: Zero values for bead backgrounds (reading idat files using Illuminaio)
10.2 years ago Kasper Daniel Hansen ★ 6.5k
0
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1
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3.1k
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Comment: C: Zero values for bead backgrounds (reading idat files using Illuminaio)
10.2 years ago Kasper Daniel Hansen ★ 6.5k
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2
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3.1k
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Comment: C: Usecase_AnnotationHub_GRanges.Rmd, genes = qhs[[1]] can't download UCSC 'refGene
10.2 years ago Kasper Daniel Hansen ★ 6.5k
1
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0
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10k
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Comment: C: Bioconductor on Coursera
updated 10.3 years ago by ★ 8.2k • written 10.3 years ago by ★ 6.5k
1
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0
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3.1k
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Answer: A: Zero values for bead backgrounds (reading idat files using Illuminaio)
10.3 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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10k
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Comment: C: Bioconductor on Coursera
10.3 years ago Kasper Daniel Hansen ★ 6.5k
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1
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3.1k
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Comment: C: preprocessNoob + preprocessQuantile Error handling preprocessMethod
10.3 years ago Kasper Daniel Hansen ★ 6.5k
1
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1
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3.1k
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Answer: A: preprocessNoob + preprocessQuantile Error handling preprocessMethod
updated 10.3 years ago by ★ 8.2k • written 10.3 years ago by ★ 6.5k
1
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1
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3.1k
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Answer: A: preprocessNoob + preprocessQuantile Error handling preprocessMethod
updated 10.3 years ago by ★ 8.2k • written 10.3 years ago by ★ 6.5k
1
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1
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2.5k
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Answer: A: minfi - estimatecellcount function
updated 10.3 years ago by ★ 8.2k • written 10.3 years ago by ★ 6.5k
1
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1
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3.6k
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Comment: C: estimateCellCounts Visualisations - Adjusting Beta Values for Plotting
10.4 years ago Kasper Daniel Hansen ★ 6.5k
1
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1
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1.8k
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Answer: A: Rgraphviz - issue with edge label when using multiple edges between two nodes
10.4 years ago Kasper Daniel Hansen ★ 6.5k
2
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0
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3.2k
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Comment: C: minfi - estimateCellCount
10.4 years ago Kasper Daniel Hansen ★ 6.5k
1
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1
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2.4k
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Answer: A: QC/normalization standards for cancer studies with 450k array data
10.4 years ago Kasper Daniel Hansen ★ 6.5k
1
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0
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3.3k
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Answer: A: Illumina 450k Annotation Definitions/Articles: How was "Enhancer" status determi
updated 10.4 years ago by ★ 8.2k • written 10.4 years ago by ★ 6.5k
0
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0
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2.1k
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Answer: A: illumina 450k methylation: Cell composition for saliva
10.7 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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3.0k
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Comment: C: Error when using readIDAT() from illuminaio
10.8 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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3.2k
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Answer: A: How to handle BSsmooth.tstat for single replicate samples? Error: need at least
10.8 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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3.0k
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Comment: C: Error when using readIDAT() from illuminaio
10.8 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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3.0k
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Answer: A: Error when using readIDAT() from illuminaio
10.8 years ago Kasper Daniel Hansen ★ 6.5k
0
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1
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2.1k
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Answer: A: maf used in minfi dropLociWithSnps
11.0 years ago Kasper Daniel Hansen ★ 6.5k
0
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0
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2.2k
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Comment: C: Memory usage in readVcf from VariantAnnotation
11.0 years ago Kasper Daniel Hansen ★ 6.5k
2
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4
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2.2k
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Memory usage in readVcf from VariantAnnotation
VariantAnnotation
11.0 years ago Kasper Daniel Hansen ★ 6.5k
2
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2
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2.3k
views
Views on BSgenome object
BSgenome
11.1 years ago Kasper Daniel Hansen ★ 6.5k
733 results • Page 3 of 15
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