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Comment: C: multicore Vignette or HowTo??
15.1 years ago Joern Toedling ▴ 450
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Answer: A: Quantile normalization in Ringo package
15.2 years ago Joern Toedling ▴ 450
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Comment: C: Error mapping RNA-seq data to genome
15.3 years ago Joern Toedling ▴ 450
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Answer: A: using smoothX in Ringo
15.3 years ago Joern Toedling ▴ 450
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Answer: A: using smoothX in Ringo
15.3 years ago Joern Toedling ▴ 450
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Answer: A: Accessing attributes of object
15.3 years ago Joern Toedling ▴ 450
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Answer: A: Ringo and dye swaps
15.3 years ago Joern Toedling ▴ 450
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Answer: A: Nimblegen 385K CpG Island Plus Promoter Arrays
15.4 years ago Joern Toedling ▴ 450
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Answer: A: get table with aanotaed genome features
15.4 years ago Joern Toedling ▴ 450
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Answer: A: R package modreg
15.4 years ago Joern Toedling ▴ 450
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Answer: A: error in function reduce from girafe
15.4 years ago Joern Toedling ▴ 450
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Answer: A: error in function reduce from girafe
15.4 years ago Joern Toedling ▴ 450
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Answer: A: annotating reads acording with position on mapping
15.5 years ago Joern Toedling ▴ 450
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Comment: C: Alignment viewer?
15.6 years ago Joern Toedling ▴ 450
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Answer: A: Annotation of orthologs
15.6 years ago Joern Toedling ▴ 450
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Answer: A: Nimblegen CGH ringo to snapCGH
15.6 years ago Joern Toedling ▴ 450
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Comment: C: chip-chip data
15.7 years ago Joern Toedling ▴ 450
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Comment: C: chip-chip data
15.7 years ago Joern Toedling ▴ 450
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Comment: C: chip-chip data
15.7 years ago Joern Toedling ▴ 450
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Answer: A: retrieveGenomicFeatureAnnotation.R file supplied with Ringo
15.7 years ago Joern Toedling ▴ 450
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Comment: C: ChIPpeakAnno
15.7 years ago Joern Toedling ▴ 450
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Answer: A: Using combineReplicates in computeRunningMedians() function in Ringo
15.8 years ago Joern Toedling ▴ 450
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Answer: A: GSEA, topGO, GOstats...? what's a good way to look at GO over-representation?
15.8 years ago Joern Toedling ▴ 450
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Answer: A: objects masked from packages
15.8 years ago Joern Toedling ▴ 450
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Answer: A: Question about RINGO and follow up analysis
15.8 years ago Joern Toedling ▴ 450
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2.0k
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Answer: A: Best options for cross validation machine learning
15.8 years ago Joern Toedling ▴ 450
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Answer: A: R question on symbolic variables
15.9 years ago Joern Toedling ▴ 450
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1.1k
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problem with arrayQualityMetrics
arrayQualityMetrics arrayQualityMetrics
updated 16.0 years ago by ▴ 280 • written 16.0 years ago by ▴ 450
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Comment: C: Ringo - finding enriched regions
16.1 years ago Joern Toedling ▴ 450
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1.9k
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Answer: A: Ringo - finding enriched regions
16.1 years ago Joern Toedling ▴ 450
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Answer: A: Installing Bioconductor with 'sudo' privilege
16.2 years ago Joern Toedling ▴ 450
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Ringo package: error using computeRunningMedians function
Ringo Ringo
16.2 years ago Joern Toedling ▴ 450
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Comment: C: Ringo package: error using computeRunningMedians function
16.2 years ago Joern Toedling ▴ 450
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Answer: A: Ringo package: error using computeRunningMedians function
16.2 years ago Joern Toedling ▴ 450
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Answer: A: hclustfun argument in heatmap.2 function
16.3 years ago Joern Toedling ▴ 450
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Answer: A: Advice for ChIPchip-Analysis
16.3 years ago Joern Toedling ▴ 450
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Answer: A: problem with 2.0 cdf
16.4 years ago Joern Toedling ▴ 450
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Answer: A: problem with 2.0 cdf
16.4 years ago Joern Toedling ▴ 450
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4.5k
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Comment: C: Normalization of array data from GEO repository
16.4 years ago Joern Toedling ▴ 450
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Post-doc position in Paris
Sequencing Epigenetics Cancer Breast DECIPHER Sequencing Epigenetics Cancer Breast
16.4 years ago Joern Toedling ▴ 450
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Answer: A: Missing Autocorrelation in Ringo
16.4 years ago Joern Toedling ▴ 450
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1.7k
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Comment: C: Missing Autocorrelation in Ringo
16.4 years ago Joern Toedling ▴ 450
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1.7k
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Answer: A: Missing Autocorrelation in Ringo
16.4 years ago Joern Toedling ▴ 450
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Answer: A: Problem with two expression sets
16.5 years ago Joern Toedling ▴ 450
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1.6k
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Answer: A: Nimblegen / Ringo / Preprocess error: inherits(myRG, "RGList") is not TRUE
16.5 years ago Joern Toedling ▴ 450
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