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hclust to newick format?
convert convert
updated 16.2 years ago by ▴ 10 • written 16.2 years ago by ★ 3.4k
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1.1k
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Answer: A: Comparing/clustering data sets from two-color and single color array
16.2 years ago michael watson IAH-C ★ 3.4k
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1
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3.0k
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Comment: C: Retrieve Entrez IDs for enriched GO terms
16.3 years ago michael watson IAH-C ★ 3.4k
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1
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3.0k
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Comment: C: Retrieve Entrez IDs for enriched GO terms
16.3 years ago michael watson IAH-C ★ 3.4k
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1.2k
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Answer: A: courses
16.4 years ago michael watson IAH-C ★ 3.4k
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2.9k
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Comment: C: Statistics for next-generation sequencing transcriptomics
16.5 years ago michael watson IAH-C ★ 3.4k
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10
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2.9k
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Statistics for next-generation sequencing transcriptomics
Sequencing SAGE Sequencing SAGE
updated 16.5 years ago by ▴ 10 • written 16.5 years ago by ★ 3.4k
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2.9k
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Comment: C: Statistics for next-generation sequencing transcriptomics
16.5 years ago michael watson IAH-C ★ 3.4k
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3
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1.6k
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Problems with biomaRt
biomaRt biomaRt
updated 16.5 years ago by ▴ 810 • written 16.5 years ago by ★ 3.4k
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1.6k
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Comment: C: Problems with biomaRt
16.5 years ago michael watson IAH-C ★ 3.4k
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0
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589
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Info about GO package
GO GO
16.5 years ago michael watson IAH-C ★ 3.4k
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888
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Answer: A: neverending GO problems
16.5 years ago michael watson IAH-C ★ 3.4k
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0
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1.6k
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Answer: A: how to merge replicate spots?
16.5 years ago michael watson IAH-C ★ 3.4k
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0
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949
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Answer: A: why 3UTR sequences cannot be obtained any more?
16.6 years ago michael watson IAH-C ★ 3.4k
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0
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2.1k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
16.6 years ago michael watson IAH-C ★ 3.4k
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1.5k
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R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics GO Homo sapiens Biostrings biomaRt miRNA Biophysics GO Homo sapiens
16.6 years ago michael watson IAH-C ★ 3.4k
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0
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2.1k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
16.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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2.1k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
16.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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2.1k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
16.6 years ago michael watson IAH-C ★ 3.4k
0
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1
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2.1k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
16.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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2.0k
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how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
16.6 years ago michael watson IAH-C ★ 3.4k
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0
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1.0k
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Answer: A: question about CORNA
16.6 years ago michael watson IAH-C ★ 3.4k
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0
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2.1k
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Answer: A: miRNA and validated/predicted target genes
16.6 years ago michael watson IAH-C ★ 3.4k
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0
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1.2k
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Answer: A: miRNA validated/predicted label
16.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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2.1k
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Comment: C: miRNA and validated/predicted target genes
16.6 years ago michael watson IAH-C ★ 3.4k
0
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1
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1.6k
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Answer: A: Change M-value calculation from red/green to green/red
16.6 years ago michael watson IAH-C ★ 3.4k
0
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1
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1.7k
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Answer: A: questions about heatmap.2
16.6 years ago michael watson IAH-C ★ 3.4k
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0
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1.3k
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Answer: A: Visualize KEGG pathway
16.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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12k
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Comment: C: Gene symbol to KEGG gene ids
16.8 years ago michael watson IAH-C ★ 3.4k
0
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1
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12k
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Answer: A: Gene symbol to KEGG gene ids
16.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.3k
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Visulising KEGG pathways using KEGGSOAP - example code
Pathways geneplotter KEGGSOAP biomaRt GEOquery Pathways geneplotter KEGGSOAP biomaRt
16.8 years ago michael watson IAH-C ★ 3.4k
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1
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1.8k
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Answer: A: Up- or down- regulated pathways or GO terms?
16.8 years ago michael watson IAH-C ★ 3.4k
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1
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1.3k
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Answer: A: Normalize data across platforms
16.8 years ago michael watson IAH-C ★ 3.4k
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0
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6.9k
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Answer: A: Heatmap without using clustering result
16.9 years ago michael watson IAH-C ★ 3.4k
0
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0
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867
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Keep getting warning messages of package 'XYZ' was builtunder R version 2.8.1
16.9 years ago michael watson IAH-C ★ 3.4k
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0
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1.4k
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Answer: A: GenomeGraphs error
17.0 years ago michael watson IAH-C ★ 3.4k
0
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0
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801
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Code for reading Oxford Gene Technology (OGT) arrays using limma
Annotation limma Annotation limma
17.1 years ago michael watson IAH-C ★ 3.4k
0
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2
replies
3.0k
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Answer: A: How to create a GO2gene object for topGO?
17.2 years ago michael watson IAH-C ★ 3.4k
0
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0
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4.3k
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Answer: A: topGO and font size in the graph plots
17.3 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.4k
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Changing fontsize in Rgraphviz
Rgraphviz Rgraphviz
17.3 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.1k
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Answer: A: Need help using read.table to read in non-standard data
17.3 years ago michael watson IAH-C ★ 3.4k
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0
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1.2k
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Answer: A: gene count in a GO term
17.3 years ago michael watson IAH-C ★ 3.4k
0
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0
replies
2.2k
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Answer: A: how to plot a distance matrix
17.3 years ago michael watson IAH-C ★ 3.4k
0
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0
replies
1.6k
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Answer: A: Query about GO term enrichment
17.3 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.2k
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Answer: A: Ensembl IDs 2 GO term enrichment --> simple solution withoutbiomart? ( I can't i
17.3 years ago michael watson IAH-C ★ 3.4k
0
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1
reply
1.2k
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Ensembl IDs 2 GO term enrichment --> simple solution withoutbiomart? ( I can't install it because of RCurl)
GO GOstats biomaRt GO GOstats biomaRt
17.3 years ago michael watson IAH-C ★ 3.4k
0
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3
replies
1.4k
views
GEOQuery - from a LOCAL SOFT file to an ExprSet object
convert GEOquery convert GEOquery
updated 17.3 years ago by 21k • written 17.3 years ago by ★ 3.4k
0
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0
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1.0k
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Answer: A: RGraphviz 1.81 / R 2.7.2 crashes on simple call to toDot
17.4 years ago michael watson IAH-C ★ 3.4k
0
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0
replies
1.8k
views
topGO and font size in the graph plots
graph Rgraphviz topGO graph Rgraphviz topGO
17.4 years ago michael watson IAH-C ★ 3.4k
0
votes
1
reply
795
views
Rgraphviz issues
updated 17.4 years ago by 6.7k • written 17.4 years ago by ★ 3.4k
337 results • Page 2 of 7
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