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hclust to newick format?
convert convert
updated 14.5 years ago by ▴ 10 • written 14.5 years ago by ★ 3.4k
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873
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Answer: A: Comparing/clustering data sets from two-color and single color array
14.5 years ago michael watson IAH-C ★ 3.4k
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1
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2.1k
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Comment: C: Retrieve Entrez IDs for enriched GO terms
14.6 years ago michael watson IAH-C ★ 3.4k
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1
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2.1k
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Comment: C: Retrieve Entrez IDs for enriched GO terms
14.6 years ago michael watson IAH-C ★ 3.4k
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0
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893
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Answer: A: courses
14.7 years ago michael watson IAH-C ★ 3.4k
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0
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1.9k
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Comment: C: Statistics for next-generation sequencing transcriptomics
14.8 years ago michael watson IAH-C ★ 3.4k
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10
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1.9k
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Statistics for next-generation sequencing transcriptomics
Sequencing SAGE Sequencing SAGE
updated 14.8 years ago by ▴ 10 • written 14.8 years ago by ★ 3.4k
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2
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1.9k
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Comment: C: Statistics for next-generation sequencing transcriptomics
14.8 years ago michael watson IAH-C ★ 3.4k
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3
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1.3k
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Problems with biomaRt
biomaRt biomaRt
updated 14.8 years ago by ▴ 810 • written 14.8 years ago by ★ 3.4k
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1.3k
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Comment: C: Problems with biomaRt
14.8 years ago michael watson IAH-C ★ 3.4k
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0
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447
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Info about GO package
GO GO
14.8 years ago michael watson IAH-C ★ 3.4k
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0
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680
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Answer: A: neverending GO problems
14.8 years ago michael watson IAH-C ★ 3.4k
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0
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1.3k
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Answer: A: how to merge replicate spots?
14.8 years ago michael watson IAH-C ★ 3.4k
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0
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649
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Answer: A: why 3UTR sequences cannot be obtained any more?
14.8 years ago michael watson IAH-C ★ 3.4k
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0
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1.5k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
14.8 years ago michael watson IAH-C ★ 3.4k
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1.1k
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R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics GO Homo sapiens Biostrings biomaRt miRNA Biophysics GO Homo sapiens
14.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.5k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
14.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.5k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
14.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.5k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
14.8 years ago michael watson IAH-C ★ 3.4k
0
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1
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1.5k
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Answer: A: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
14.8 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.7k
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how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
14.9 years ago michael watson IAH-C ★ 3.4k
0
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0
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781
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Answer: A: question about CORNA
14.9 years ago michael watson IAH-C ★ 3.4k
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0
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1.6k
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Answer: A: miRNA and validated/predicted target genes
14.9 years ago michael watson IAH-C ★ 3.4k
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0
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858
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Answer: A: miRNA validated/predicted label
14.9 years ago michael watson IAH-C ★ 3.4k
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0
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1.6k
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Comment: C: miRNA and validated/predicted target genes
14.9 years ago michael watson IAH-C ★ 3.4k
0
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1
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1.2k
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Answer: A: Change M-value calculation from red/green to green/red
14.9 years ago michael watson IAH-C ★ 3.4k
0
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1
reply
1.3k
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Answer: A: questions about heatmap.2
14.9 years ago michael watson IAH-C ★ 3.4k
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0
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869
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Answer: A: Visualize KEGG pathway
15.0 years ago michael watson IAH-C ★ 3.4k
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0
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9.6k
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Comment: C: Gene symbol to KEGG gene ids
15.0 years ago michael watson IAH-C ★ 3.4k
0
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1
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9.6k
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Answer: A: Gene symbol to KEGG gene ids
15.0 years ago michael watson IAH-C ★ 3.4k
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0
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900
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Visulising KEGG pathways using KEGGSOAP - example code
Pathways geneplotter KEGGSOAP biomaRt GEOquery Pathways geneplotter KEGGSOAP biomaRt
15.0 years ago michael watson IAH-C ★ 3.4k
0
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1
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1.3k
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Answer: A: Up- or down- regulated pathways or GO terms?
15.1 years ago michael watson IAH-C ★ 3.4k
0
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1
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954
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Answer: A: Normalize data across platforms
15.1 years ago michael watson IAH-C ★ 3.4k
0
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0
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6.0k
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Answer: A: Heatmap without using clustering result
15.2 years ago michael watson IAH-C ★ 3.4k
0
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0
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677
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Keep getting warning messages of package 'XYZ' was builtunder R version 2.8.1
15.2 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.1k
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Answer: A: GenomeGraphs error
15.3 years ago michael watson IAH-C ★ 3.4k
0
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0
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620
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Code for reading Oxford Gene Technology (OGT) arrays using limma
Annotation limma Annotation limma
15.4 years ago michael watson IAH-C ★ 3.4k
0
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2
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2.3k
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Answer: A: How to create a GO2gene object for topGO?
15.5 years ago michael watson IAH-C ★ 3.4k
0
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0
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3.6k
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Answer: A: topGO and font size in the graph plots
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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1.2k
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Changing fontsize in Rgraphviz
Rgraphviz Rgraphviz
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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778
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Answer: A: Need help using read.table to read in non-standard data
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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831
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Answer: A: gene count in a GO term
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
replies
2.0k
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Answer: A: how to plot a distance matrix
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
replies
1.2k
views
Answer: A: Query about GO term enrichment
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
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920
views
Answer: A: Ensembl IDs 2 GO term enrichment --> simple solution withoutbiomart? ( I can't i
15.6 years ago michael watson IAH-C ★ 3.4k
0
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1
reply
920
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Ensembl IDs 2 GO term enrichment --> simple solution withoutbiomart? ( I can't install it because of RCurl)
GO GOstats biomaRt GO GOstats biomaRt
15.6 years ago michael watson IAH-C ★ 3.4k
0
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3
replies
1.1k
views
GEOQuery - from a LOCAL SOFT file to an ExprSet object
convert GEOquery convert GEOquery
updated 15.6 years ago by 21k • written 15.6 years ago by ★ 3.4k
0
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0
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796
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Answer: A: RGraphviz 1.81 / R 2.7.2 crashes on simple call to toDot
15.6 years ago michael watson IAH-C ★ 3.4k
0
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0
replies
1.5k
views
topGO and font size in the graph plots
graph Rgraphviz topGO graph Rgraphviz topGO
15.6 years ago michael watson IAH-C ★ 3.4k
0
votes
1
reply
592
views
Rgraphviz issues
updated 15.6 years ago by 6.7k • written 15.6 years ago by ★ 3.4k
337 results • Page 2 of 7
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