Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
561
views
Answer: Answer: seqinfo got changed after `library(rtracklayer)`
15 months ago Michael Lawrence 11k
1
vote
0
replies
464
views
Comment: Comment: How to apply a function to a RleViesList object?
18 months ago Michael Lawrence 11k
0
votes
0
replies
584
views
Comment: Comment: how to get genomic coordinates from an MIndex object
20 months ago Michael Lawrence 11k
2
votes
1
reply
584
views
Answer: Answer: how to get genomic coordinates from an MIndex object
20 months ago Michael Lawrence 11k
0
votes
1
reply
819
views
Comment: Comment: IRanges::findOverlapPairs cannot take inputs if they are too large
23 months ago Michael Lawrence 11k
1
vote
1
reply
819
views
Answer: Answer: IRanges::findOverlapPairs cannot take inputs if they are too large
23 months ago Michael Lawrence 11k
1
vote
1
reply
941
views
Answer: Answer: liftOver bug, reproducible
2.2 years ago Michael Lawrence 11k
0
votes
1
reply
506
views
Comment: Comment: I am getting a segfault reading a SBML file with rsbml_read
2.2 years ago Michael Lawrence 11k
0
votes
1
reply
924
views
Comment: Comment: `ggbio` package can't be installed
2.2 years ago Michael Lawrence 11k
0
votes
0
replies
495
views
Answer: Answer: Average coverage between multiple samples
2.3 years ago Michael Lawrence 11k
2
votes
1
reply
614
views
Answer: Answer: Recycling a DNAStringSet over an IRangesList in extractAt()
2.3 years ago Michael Lawrence 11k
0
votes
0
replies
2.1k
views
Comment: Comment: RStudio vs R: using rtracklayer to import bigwig files from http works in R but
2.3 years ago Michael Lawrence 11k
1
vote
0
replies
1.6k
views
Answer: A: How do I subset a GRanges object based on chromosome (and approximate region)?
2.6 years ago Michael Lawrence 11k
1
vote
0
replies
951
views
Comment: C: GRanges/GFeatures: Retain all parent columns in cdsByOverlaps output
2.6 years ago Michael Lawrence 11k
0
votes
1
reply
951
views
Comment: C: GRanges/GFeatures: Retain all parent columns in cdsByOverlaps output
2.6 years ago Michael Lawrence 11k
1
vote
0
replies
944
views
Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
2.8 years ago Michael Lawrence 11k
1
vote
1
reply
944
views
Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
2.8 years ago Michael Lawrence 11k
1
vote
0
replies
944
views
Comment: C: Compare ranges from two GRanges and check if the ranges from the first GRanges i
2.8 years ago Michael Lawrence 11k
0
votes
1
reply
543
views
Answer: A: How to create GRanges for TES
2.9 years ago Michael Lawrence 11k
3
votes
0
replies
942
views
Comment: C: How to extract positions present in one genomic ranges object and not the other?
2.9 years ago Michael Lawrence 11k
2
votes
1
reply
797
views
Answer: A: Genomic Ranges: Convert from 0-base to 1-base
2.9 years ago Michael Lawrence 11k
1
vote
0
replies
1.2k
views
Answer: A: Rtracklayer exporting Granges object as bigwig error: Features cannot overlap
3.0 years ago Michael Lawrence 11k
0
votes
1
reply
1.1k
views
Comment: C: Error "cannot map the following UCSC seqlevel(s) to an NCBI seqlevel" in package
3.0 years ago Michael Lawrence 11k
0
votes
0
replies
465
views
Comment: C: Does biovizBase contain a genesymbol data set for other model organisms?
3.0 years ago Michael Lawrence 11k
0
votes
0
replies
1.1k
views
Comment: C: rtracklayer: error in importing bigwig file in r in windows
3.1 years ago Michael Lawrence 11k
0
votes
0
replies
430
views
Answer: A: getting snp and restriction Enzyme site from ucsc genome browswer
3.1 years ago Michael Lawrence 11k
1
vote
1
reply
970
views
Answer: A: S4Vectors not loading
3.1 years ago Michael Lawrence 11k
1
vote
0
replies
970
views
Comment: C: S4Vectors not loading
3.1 years ago Michael Lawrence 11k
0
votes
0
replies
1.6k
views
Comment: C: rsbml fails to compile on Linux due to ParseMessage.h undetected with libSBML 5
3.1 years ago Michael Lawrence 11k
0
votes
2
replies
992
views
Answer: A: GenomicRanges: Find first, second and third nearest genes
3.1 years ago Michael Lawrence 11k
1
vote
0
replies
371
views
Answer: A: Rtracklayer fails to export TxDb as GFF3 without CDS
3.1 years ago Michael Lawrence 11k
3
votes
1
reply
640
views
Answer: A: GenomicRanges: Find N nearest/preceding/following ranges
3.2 years ago Michael Lawrence 11k
0
votes
0
replies
569
views
Comment: C: Resize exons in transcript to total width
3.3 years ago Michael Lawrence 11k
0
votes
1
reply
569
views
Answer: A: Resize exons in transcript to total width
3.3 years ago Michael Lawrence 11k
0
votes
1
reply
477
views
Answer: A: ggbio tracks not aligned when legend present in one track
3.3 years ago Michael Lawrence 11k
0
votes
0
replies
444
views
Comment: C: An error while finding pintersect()
3.4 years ago Michael Lawrence 11k
1
vote
1
reply
506
views
Answer: A: rtracklayer::export empty score
3.4 years ago Michael Lawrence 11k
1
vote
0
replies
962
views
Comment: C: How to query a base along an aligned read by genomic position?
3.4 years ago Michael Lawrence 11k
1
vote
1
reply
962
views
Comment: C: How to query a base along an aligned read by genomic position?
3.4 years ago Michael Lawrence 11k
0
votes
1
reply
1.1k
views
Comment: C: Annotating GRanges with TxDb gene models using plyranges
3.5 years ago Michael Lawrence 11k
0
votes
0
replies
1.1k
views
Answer: A: Coverage function assigns wrong weights for gapped alignments
3.5 years ago Michael Lawrence 11k
0
votes
0
replies
735
views
Comment: C: Can GenomicRanges findOverlaps ignore seqnames?
3.5 years ago Michael Lawrence 11k
0
votes
0
replies
938
views
Comment: C: Best way to subset one IRanges by list of IRanges
3.5 years ago Michael Lawrence 11k
0
votes
1
reply
938
views
Comment: C: Best way to subset one IRanges by list of IRanges
3.5 years ago Michael Lawrence 11k
0
votes
1
reply
938
views
Comment: C: Best way to subset one IRanges by list of IRanges
3.5 years ago Michael Lawrence 11k
1
vote
2
replies
1.6k
views
Comment: C: Subsetting a GenomicRanges::GRanges with "%in%" fails
3.6 years ago Michael Lawrence 11k
1
vote
0
replies
485
views
Comment: C: Checking if to DataFrames are identical
3.6 years ago Michael Lawrence 11k
1
vote
1
reply
582
views
Answer: A: Is it useful to define and export a setAs('BSgenome', 'GRanges')
3.6 years ago Michael Lawrence 11k
1
vote
1
reply
1.6k
views
Comment: C: Subsetting a GenomicRanges::GRanges with "%in%" fails
3.6 years ago Michael Lawrence 11k
0
votes
0
replies
1.2k
views
Answer: A: Filtering GFF3 file
3.6 years ago Michael Lawrence 11k
1,381 results • Page 1 of 28
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6