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Comment: C: nearest without overlapping
7.7 years ago Michael Lawrence ★ 11k
0
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1
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1.9k
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Comment: C: rtracklayer::import.bed does not close connections.
7.7 years ago Michael Lawrence ★ 11k
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1.7k
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Comment: C: Error: invalid class "VRanges" object
7.7 years ago Michael Lawrence ★ 11k
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0
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2.5k
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Comment: C: Merging each element of a list of Genomic range
7.7 years ago Michael Lawrence ★ 11k
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2.5k
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Answer: A: Merging each element of a list of Genomic range
7.7 years ago Michael Lawrence ★ 11k
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6.2k
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Comment: C: unlist doesn't work for IRanges
7.8 years ago Michael Lawrence ★ 11k
1
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0
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4.4k
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Comment: C: rtracklayer::lifOver one-to-many regions and not match UCSC
7.8 years ago Michael Lawrence ★ 11k
0
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2.7k
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Comment: C: Issue with UCSC and rtracklayer: 'names' attribute [210] must be the same length
7.8 years ago Michael Lawrence ★ 11k
1
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0
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2.7k
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Answer: A: Issue with UCSC and rtracklayer: 'names' attribute [210] must be the same length
7.8 years ago Michael Lawrence ★ 11k
0
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1
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3.1k
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Answer: A: S4Vectors and subectHits error
7.9 years ago Michael Lawrence ★ 11k
0
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0
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1.8k
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Answer: A: rtracklayer::liftOver parameters (minMatch)
7.9 years ago Michael Lawrence ★ 11k
0
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1.3k
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Comment: C: Detect Sites with Minimum Gap in GRanges Object
7.9 years ago Michael Lawrence ★ 11k
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1.2k
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Answer: A: rtracklayer colorByStrand - is it possible to add quotes?
7.9 years ago Michael Lawrence ★ 11k
1
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1
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2.4k
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Answer: A: Detecting Overlaps within Grange Object
7.9 years ago Michael Lawrence ★ 11k
2
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1
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1.2k
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Answer: A: Features within 2kb window, but with resampling
8.0 years ago Michael Lawrence ★ 11k
0
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0
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1.3k
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Answer: A: import bed file with track line fails
8.0 years ago Michael Lawrence ★ 11k
1
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0
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1.3k
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Answer: A: rtracklayer demo bug
8.0 years ago Michael Lawrence ★ 11k
2
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0
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1.1k
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Answer: A: Finding the nearest n genes from a genomic loci
8.0 years ago Michael Lawrence ★ 11k
0
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0
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2.6k
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Comment: C: Splitting lines of a GRanges object based on character list
8.0 years ago Michael Lawrence ★ 11k
0
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1
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2.6k
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Comment: C: Splitting lines of a GRanges object based on character list
8.0 years ago Michael Lawrence ★ 11k
2
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1
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2.6k
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Answer: A: Splitting lines of a GRanges object based on character list
8.0 years ago Michael Lawrence ★ 11k
0
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1
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2.5k
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Comment: C: Gviz IdeogramTrack fails with Error: failed to load HTTP resource
8.1 years ago Michael Lawrence ★ 11k
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0
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1.5k
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Comment: C: issue retrieving metadata after psetdiff function
8.1 years ago Michael Lawrence ★ 11k
0
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0
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2.3k
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Comment: C: Genomic Features UCSC refseq genes "Download the knownGene table ... Error: Bad
8.1 years ago Michael Lawrence ★ 11k
1
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1
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2.3k
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Answer: A: Genomic Features UCSC refseq genes "Download the knownGene table ... Error: Bad
8.1 years ago Michael Lawrence ★ 11k
0
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0
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6.8k
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Comment: C: GenomicRanges: identify overlapping regions, get intersection between each overl
8.1 years ago Michael Lawrence ★ 11k
1
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1
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6.8k
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Answer: A: GenomicRanges: identify overlapping regions, get intersection between each overl
8.1 years ago Michael Lawrence ★ 11k
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1
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6.8k
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Comment: C: GenomicRanges: identify overlapping regions, get intersection between each overl
8.1 years ago Michael Lawrence ★ 11k
1
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0
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2.0k
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Comment: C: GRanges object from gene list
8.1 years ago Michael Lawrence ★ 11k
1
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1
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2.0k
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Answer: A: GRanges object from gene list
8.1 years ago Michael Lawrence ★ 11k
0
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0
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2.2k
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Comment: C: Make window around TSS and get values from another data.frame for bins of the sp
8.1 years ago Michael Lawrence ★ 11k
2
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1
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2.2k
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Answer: A: Make window around TSS and get values from another data.frame for bins of the sp
8.1 years ago Michael Lawrence ★ 11k
1
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0
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1.7k
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Answer: A: seqnames versus chrom
8.1 years ago Michael Lawrence ★ 11k
0
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0
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2.8k
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Comment: C: Add columns to granges object that sum score around range
8.2 years ago Michael Lawrence ★ 11k
0
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1
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2.8k
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Answer: A: Add columns to granges object that sum score around range
8.2 years ago Michael Lawrence ★ 11k
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2
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2.8k
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Comment: C: Add columns to granges object that sum score around range
8.2 years ago Michael Lawrence ★ 11k
1
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1
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4.7k
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Answer: A: Generate 3' UTR and 5' UTR ranges from a gff file
8.2 years ago Michael Lawrence ★ 11k
0
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0
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2.3k
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Comment: C: breakTies for a Hits-object based on value in mcols?
8.2 years ago Michael Lawrence ★ 11k
3
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2
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2.3k
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Answer: A: breakTies for a Hits-object based on value in mcols?
8.2 years ago Michael Lawrence ★ 11k
1
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1
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2.3k
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Comment: C: breakTies for a Hits-object based on value in mcols?
8.2 years ago Michael Lawrence ★ 11k
0
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0
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3.0k
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Comment: C: possible Rtracklayer issue: TxDb errors in GenomicFeatures package-- cannot load
8.2 years ago Michael Lawrence ★ 11k
0
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0
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2.0k
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Comment: C: makeTxdbFromUCSC in genomicfeatures package is broken
8.2 years ago Michael Lawrence ★ 11k
0
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1
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3.0k
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Answer: A: possible Rtracklayer issue: TxDb errors in GenomicFeatures package-- cannot load
8.2 years ago Michael Lawrence ★ 11k
0
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0
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1.7k
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Comment: C: How to get UCSC url when use rtracklayer, contain the track in the url ,it may
8.2 years ago Michael Lawrence ★ 11k
0
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1
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2.0k
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Answer: A: makeTxdbFromUCSC in genomicfeatures package is broken
8.2 years ago Michael Lawrence ★ 11k
1
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0
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2.7k
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Answer: A: Intron length per transcript using GenomicFeatures
8.3 years ago Michael Lawrence ★ 11k
0
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0
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1.2k
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Answer: A: GRangesList: wiered error
8.3 years ago Michael Lawrence ★ 11k
0
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0
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1.5k
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Comment: C: cmetindex missing in gmapr? Not possible to do bisulfite alignments
8.3 years ago Michael Lawrence ★ 11k
0
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1
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1.5k
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Answer: A: cmetindex missing in gmapr? Not possible to do bisulfite alignments
8.3 years ago Michael Lawrence ★ 11k
3
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1
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2.7k
views
Answer: A: unlist a exons GRangeslist object and add a gene name column
8.3 years ago Michael Lawrence ★ 11k
1,381 results • Page 4 of 28
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