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890
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Comment: C: dealing with BATCH effect/ donor variation in RNA seq data
3.8 years ago Simon Anders ★ 3.7k
0
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1
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892
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Answer: A: DEXSeq : can we plot from the table of results or/and run DEXSeq from a matrix o
3.8 years ago Simon Anders ★ 3.7k
2
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1
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866
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Answer: A: Mocking data for understanding interactions in DESeq2
4.1 years ago Simon Anders ★ 3.7k
0
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1
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1.3k
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Answer: A: Wrong results of DESeq compared to DESeq2 for some test cases?
4.1 years ago Simon Anders ★ 3.7k
0
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0
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1.3k
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Comment: C: Wrong results of DESeq compared to DESeq2 for some test cases?
4.1 years ago Simon Anders ★ 3.7k
0
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0
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1.2k
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Comment: C: how to analyze and find differentially expressed genes based on miRNA gene raw
4.3 years ago Simon Anders ★ 3.7k
0
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1
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1.2k
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Answer: C: how to analyze and find differentially expressed genes based on miRNA gene raw
4.3 years ago Simon Anders ★ 3.7k
4
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1
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4.5k
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Answer: A: TMM Normalization: DESeqDataSet: some values in assay are negative
4.8 years ago Simon Anders ★ 3.7k
0
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0
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1.7k
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Comment: C: Paired samples in cell lines using DESeq2
4.8 years ago Simon Anders ★ 3.7k
0
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1
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900
views
Answer: A: DEXSeq error in dexseq_count.py. ValueError: need more than 4 values to unpack
4.9 years ago Simon Anders ★ 3.7k
0
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2
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979
views
Comment: C: Genes that have NOT changed
5.4 years ago Simon Anders ★ 3.7k
1
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0
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924
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Job: applied methods development for single-cell sequencing
single-cell job computational biology Job
5.4 years ago Simon Anders ★ 3.7k
0
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0
replies
854
views
Comment: C: p-values smaller than machine epsilon in DESeq2
5.5 years ago Simon Anders ★ 3.7k
0
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1
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2.7k
views
Comment: C: DESeq2 Time Series and "control" condition
updated 5.6 years ago by 41k • written 5.6 years ago by ★ 3.7k
0
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0
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1.0k
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Job: PhD opportunity in Heidelberg for computational people
PhD position job single-cell Job
5.6 years ago Simon Anders ★ 3.7k
4
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0
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14k
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Answer: A: latest version of R is 3.5.1 and it does not compatible with many Bioconductor p
5.7 years ago Simon Anders ★ 3.7k
0
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1
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2.1k
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Comment: C: DESeq2 Multi factor, multi time point comparison design formula
5.7 years ago Simon Anders ★ 3.7k
0
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0
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1.3k
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Answer: A: RNA-seq data analysis with two species using DESeq2
5.8 years ago Simon Anders ★ 3.7k
0
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1
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1.3k
views
Comment: C: RNA-seq data analysis with two species using DESeq2
5.8 years ago Simon Anders ★ 3.7k
0
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1
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607
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Answer: A: should I get the logarithm of count values when I use standard method
5.9 years ago Simon Anders ★ 3.7k
1
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0
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1.3k
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Answer: A: ASE using DESeq2
5.9 years ago Simon Anders ★ 3.7k
0
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0
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13k
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Comment: C: Normalization by DEseq
6.2 years ago Simon Anders ★ 3.7k
0
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0
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4.7k
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Comment: C: Comparing between two differential expression analysis - two different fold chan
6.2 years ago Simon Anders ★ 3.7k
0
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0
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947
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Comment: C: Requesting help with RNA-Seq differential gene analysis
6.2 years ago Simon Anders ★ 3.7k
0
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0
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4.7k
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Comment: C: Comparing between two differential expression analysis - two different fold chan
6.2 years ago Simon Anders ★ 3.7k
0
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2
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4.7k
views
Answer: A: Comparing between two differential expression analysis - two different fold chan
6.2 years ago Simon Anders ★ 3.7k
1
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0
replies
803
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Comment: C: Errors of loading HilbertVisGUI
6.3 years ago Simon Anders ★ 3.7k
1
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1
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3.3k
views
Comment: C: DESeq2 results export padj sorted
6.3 years ago Simon Anders ★ 3.7k
0
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1
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3.3k
views
Comment: C: DESeq2 results export padj sorted
6.3 years ago Simon Anders ★ 3.7k
0
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1
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3.3k
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Comment: C: DESeq2 results export padj sorted
6.3 years ago Simon Anders ★ 3.7k
1
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0
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1.9k
views
Comment: C: Matrix not full rank - DESeq2
6.3 years ago Simon Anders ★ 3.7k
1
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1
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1.9k
views
Answer: A: Matrix not full rank - DESeq2
6.3 years ago Simon Anders ★ 3.7k
1
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1
reply
2.8k
views
Answer: A: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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0
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
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2.8k
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Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
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2.8k
views
Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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0
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2.8k
views
Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
reply
2.8k
views
Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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2
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2.8k
views
Comment: C: Error: C stack usage when installing Txdb package
6.4 years ago Simon Anders ★ 3.7k
0
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1
reply
1.9k
views
Comment: C: Standardizing gene symbols
6.5 years ago Simon Anders ★ 3.7k
0
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0
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21k
views
Answer: A: Determining gene expression levels with DESeq2 in a design with no condition
6.5 years ago Simon Anders ★ 3.7k
0
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1
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732
views
Comment: C: deseq2 low read input
6.6 years ago Simon Anders ★ 3.7k
0
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1
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4.7k
views
Comment: C: DESeq2 unequal sample sizes
6.6 years ago Simon Anders ★ 3.7k
0
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1
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2.4k
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Comment: C: Sample label swap in HTML results
6.9 years ago Simon Anders ★ 3.7k
0
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2
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2.4k
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Comment: C: Sample label swap in HTML results
6.9 years ago Simon Anders ★ 3.7k
0
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1
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5.8k
views
Comment: C: P values from Deseq Analysis
7.0 years ago Simon Anders ★ 3.7k
0
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0
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5.8k
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Comment: C: P values from Deseq Analysis
7.0 years ago Simon Anders ★ 3.7k
4
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0
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5.8k
views
Answer: A: P values from Deseq Analysis
7.0 years ago Simon Anders ★ 3.7k
2
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0
replies
1.4k
views
Job: PhD Position for computational scientist in Heidelberg
computational biology job bioinformatician job Job
7.0 years ago Simon Anders ★ 3.7k
3
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1
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2.1k
views
Comment: C: DESeq2: interaction term as in limma
7.0 years ago Simon Anders ★ 3.7k
389 results • Page 1 of 8
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