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0
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6.2k
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log transform in RMA normalization
Normalization probe Normalization probe
updated 20 months ago by ▴ 20 • written 11.3 years ago by ▴ 440
67
votes
8
replies
55k
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conceptual question about FDR, FDR adjusted p-value and q-value
fdr qvalue
updated 7.6 years ago by 50k • written 11.4 years ago by ▴ 440
0
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0
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893
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question regarding function IMA.methy450PP in IMA package
PROcess PROcess
10.2 years ago Jack Luo ▴ 440
0
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3
replies
1.4k
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where to find a list of housekeeping genes for Affy array (Gene 1.0 ST)
updated 11.0 years ago by ★ 3.3k • written 11.0 years ago by ▴ 440
0
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0
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1.1k
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Comment: C: options on outputing gene expression based on gene level instead of probe set le
11.1 years ago Jack Luo ▴ 440
0
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5
replies
1.1k
views
options on outputing gene expression based on gene level instead of probe set level for justRMA
probe probe
updated 11.1 years ago by ★ 3.0k • written 11.2 years ago by ▴ 440
0
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2
replies
1.5k
views
xps installation question
xps xps
updated 11.3 years ago by ★ 3.9k • written 11.3 years ago by ▴ 440
0
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0
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1.0k
views
Comment: C: question of justRMA on exon array
11.3 years ago Jack Luo ▴ 440
0
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2
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1.0k
views
question of justRMA on exon array
cdf affy cdf affy
updated 11.3 years ago by 65k • written 11.3 years ago by ▴ 440
0
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1
reply
1.7k
views
Comment: C: question regarding using cummeRbund package
11.8 years ago Jack Luo ▴ 440
0
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1
reply
1.7k
views
Comment: C: question regarding using cummeRbund package
11.8 years ago Jack Luo ▴ 440
0
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6
replies
1.7k
views
question regarding using cummeRbund package
updated 11.8 years ago by ★ 6.8k • written 11.8 years ago by ▴ 440
0
votes
1
reply
1.1k
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question regarding using cummeRbund package
cummeRbund cummeRbund
updated 11.8 years ago by ★ 8.2k • written 11.8 years ago by ▴ 440
0
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0
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1.0k
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Comment: C: what is the correct way of normalizing 3 different U133 platforms using RMA?
12.7 years ago Jack Luo ▴ 440
0
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2
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1.0k
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what is the correct way of normalizing 3 different U133 platforms using RMA?
probe probe
updated 12.7 years ago by 65k • written 12.7 years ago by ▴ 440
0
votes
4
replies
1.0k
views
stuck in biocLite("GEOquery")
GEOquery GEOquery
updated 13.2 years ago by ★ 8.2k • written 13.2 years ago by ▴ 440
0
votes
1
reply
1.0k
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Comment: C: stuck in biocLite("GEOquery")
13.2 years ago Jack Luo ▴ 440
1
vote
0
replies
1.4k
views
"No significant surrogate variables" for SVA (surrogate variable analysis)
sva sva
13.5 years ago Jack Luo ▴ 440
0
votes
1
reply
950
views
error msg for probe match (altcdfenvs)
probe altcdfenvs probe altcdfenvs
updated 13.5 years ago by ★ 2.3k • written 13.5 years ago by ▴ 440
0
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1
reply
1.6k
views
Comment: C: question regarding differential expression
13.6 years ago Jack Luo ▴ 440
0
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0
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1.6k
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Comment: C: question regarding differential expression
13.6 years ago Jack Luo ▴ 440
0
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10
replies
1.6k
views
question regarding differential expression
Microarray Microarray
updated 13.6 years ago by 65k • written 13.6 years ago by ▴ 440
0
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0
replies
1.6k
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Comment: C: question regarding differential expression
13.6 years ago Jack Luo ▴ 440
0
votes
1
reply
1.6k
views
Comment: C: question regarding differential expression
13.6 years ago Jack Luo ▴ 440
0
votes
1
reply
943
views
how to get the statistics of wilcoxon signed-rank test for the detection call of the MAS5 algorithm?
updated 13.6 years ago by 65k • written 13.6 years ago by ▴ 440
0
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0
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571
views
question regarding ALU sequence
13.6 years ago Jack Luo ▴ 440
0
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0
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1.4k
views
Comment: C: question regarding removing probes/probe sets before normalization
13.7 years ago Jack Luo ▴ 440
0
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0
replies
1.4k
views
Comment: C: question regarding removing probes/probe sets before normalization
13.7 years ago Jack Luo ▴ 440
0
votes
0
replies
1.4k
views
Answer: A: question regarding removing probes/probe sets before normalization
13.7 years ago Jack Luo ▴ 440
0
votes
0
replies
719
views
question regarding removing probes/probe sets before normalization
Normalization cdf probe Normalization cdf probe
13.7 years ago Jack Luo ▴ 440
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