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Has anyone successfully used sva packages?
limma sva limma sva
updated 14.2 years ago by ▴ 60 • written 14.2 years ago by ▴ 970
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sva remove batch effect.
sva sva
14.2 years ago Fabrice Tourre ▴ 970
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5.2k
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Comment: C: PCA to remove batch effect.
14.2 years ago Fabrice Tourre ▴ 970
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1
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5.2k
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Comment: C: PCA to remove batch effect.
14.2 years ago Fabrice Tourre ▴ 970
0
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1
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5.2k
views
Comment: C: PCA to remove batch effect.
14.2 years ago Fabrice Tourre ▴ 970
0
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8
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5.2k
views
PCA to remove batch effect.
updated 14.2 years ago by ★ 2.0k • written 14.2 years ago by ▴ 970
2
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2
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3.5k
views
How to output Normalised count data from DESeq?
DESeq DESeq
updated 14.5 years ago by ▴ 810 • written 14.5 years ago by ▴ 970
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0
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2.4k
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Comment: C: Where is DEXSeq bioconductor package?
14.6 years ago Fabrice Tourre ▴ 970
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2
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2.4k
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Comment: C: Where is DEXSeq bioconductor package?
14.6 years ago Fabrice Tourre ▴ 970
0
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2
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2.4k
views
Comment: C: Where is DEXSeq bioconductor package?
14.6 years ago Fabrice Tourre ▴ 970
0
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6
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1.9k
views
Where is DEXSeq bioconductor package?
DEXSeq DEXSeq
updated 14.6 years ago by ★ 3.8k • written 14.6 years ago by ▴ 970
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0
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1.9k
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Comment: C: Where is DEXSeq bioconductor package?
14.6 years ago Fabrice Tourre ▴ 970
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0
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1.5k
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Comment: C: help with ACME package
14.7 years ago Fabrice Tourre ▴ 970
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0
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1.5k
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Comment: C: help with ACME package
14.7 years ago Fabrice Tourre ▴ 970
0
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1
reply
1.4k
views
GenomicFeatures more detail.
SNP annotate GenomicFeatures SNP annotate GenomicFeatures
updated 14.7 years ago by ★ 6.8k • written 14.7 years ago by ▴ 970
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0
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3.2k
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Comment: C: Biomart server down?
14.8 years ago Fabrice Tourre ▴ 970
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1
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4.6k
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Comment: C: Get all 3'utr and 5'utr region from GenomicFeatures
14.8 years ago Fabrice Tourre ▴ 970
0
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4
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4.6k
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Get all 3'utr and 5'utr region from GenomicFeatures
GenomicFeatures GenomicFeatures
updated 14.8 years ago by 68k • written 14.8 years ago by ▴ 970
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2
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1.1k
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How to quikly know whether two genes are in the same pathway or not?
14.8 years ago Fabrice Tourre ▴ 970
0
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1
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1.1k
views
Answer: A: How to quikly know whether two genes are in the same pathway or not?
14.8 years ago Fabrice Tourre ▴ 970
0
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1
reply
3.2k
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Comment: C: Biomart server down?
14.8 years ago Fabrice Tourre ▴ 970
0
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1
reply
3.2k
views
Comment: C: Biomart server down?
14.8 years ago Fabrice Tourre ▴ 970
0
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1
reply
3.2k
views
Comment: C: Biomart server down?
14.8 years ago Fabrice Tourre ▴ 970
0
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1
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3.2k
views
Comment: C: Biomart server down?
14.8 years ago Fabrice Tourre ▴ 970
1
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0
replies
1.4k
views
biomart Ensembl Regulatory Build
SNP Transcription biomaRt SNP Transcription biomaRt
14.8 years ago Fabrice Tourre ▴ 970
0
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1
reply
990
views
Chromosome: HSCHR17_1
biomaRt biomaRt
updated 14.8 years ago by ▴ 540 • written 14.8 years ago by ▴ 970
0
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1
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1.2k
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Human Exon array annotation problem.
Annotation affy xmapcore Annotation affy xmapcore
updated 14.8 years ago by ▴ 190 • written 14.8 years ago by ▴ 970
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11
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2.4k
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Average based on group
updated 14.8 years ago by ▴ 260 • written 14.8 years ago by ▴ 970
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2
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2.4k
views
Comment: C: Average based on group
14.8 years ago Fabrice Tourre ▴ 970
0
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0
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2.4k
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Comment: C: Average based on group
14.8 years ago Fabrice Tourre ▴ 970
0
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5
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4.7k
views
Fast way to find which gene a snp located.
SNP GenomicFeatures SNP GenomicFeatures
updated 14.8 years ago by ▴ 10 • written 14.8 years ago by ▴ 970
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0
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1.3k
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snp anotation
SNP Annotation SNP Annotation
14.9 years ago Fabrice Tourre ▴ 970
0
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0
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2.2k
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Comment: C: Calculate coverage on genome.
15.0 years ago Fabrice Tourre ▴ 970
0
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1
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2.2k
views
Comment: C: Calculate coverage on genome.
15.0 years ago Fabrice Tourre ▴ 970
0
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5
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2.2k
views
Calculate coverage on genome.
15.0 years ago Fabrice Tourre ▴ 970
0
votes
1
reply
2.2k
views
Answer: A: Calculate coverage on genome.
15.0 years ago Fabrice Tourre ▴ 970
0
votes
1
reply
1.1k
views
Help for GOstats packages
Annotation GOstats Annotation GOstats
updated 15.0 years ago by ★ 7.2k • written 15.0 years ago by ▴ 970
0
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0
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4.9k
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Comment: C: How to get the all CpG sites genome postion for mm9?
15.1 years ago Fabrice Tourre ▴ 970
0
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0
replies
860
views
Packages for NimbleGen 385K CpG Island Plus Promoter Arrays?
15.2 years ago Fabrice Tourre ▴ 970
0
votes
1
reply
1.7k
views
limma, remove two type of batch effect
limma limma
updated 15.2 years ago by ★ 4.2k • written 15.2 years ago by ▴ 970
0
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0
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1.4k
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Comment: C: Is there a place to download GenomicFeatures' sqlite from ensembl.
15.2 years ago Fabrice Tourre ▴ 970
0
votes
3
replies
1.4k
views
Is there a place to download GenomicFeatures' sqlite from ensembl.
TranscriptDb TranscriptDb
updated 15.2 years ago by ★ 11k • written 15.2 years ago by ▴ 970
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