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Comment: More regions in union when increasing DBA$config$mergeOverlap
9 weeks ago
Ian D.
▴ 70
0
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0
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249
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DiffBind - observation that the default union overlap is actually a gap of 1 bp
DiffBind
4 months ago
Ian D.
▴ 70
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0
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1.3k
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Comment: More regions in union when increasing DBA$config$mergeOverlap
4 months ago
Ian D.
▴ 70
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1.3k
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Comment:
Comment: More regions in union when increasing DBA$config$mergeOverlap
4 months ago
Ian D.
▴ 70
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1.3k
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Comment: More regions in union when increasing DBA$config$mergeOverlap
6 months ago
Ian D.
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1.3k
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Comment: More regions in union when increasing DBA$config$mergeOverlap
7 months ago
Ian D.
▴ 70
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1.3k
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Comment: More regions in union when increasing DBA$config$mergeOverlap
7 months ago
Ian D.
▴ 70
0
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288
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How to create consensus peak sets for each group to use in DiffBind?
DiffBind
7 months ago
Ian D.
▴ 70
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6
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1.3k
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Comment:
Comment: More regions in union when increasing DBA$config$mergeOverlap
7 months ago
Ian D.
▴ 70
0
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9
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1.3k
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More regions in union when increasing DBA$config$mergeOverlap
DiffBind
7 months ago • updated 9 weeks ago
Ian D.
▴ 70
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975
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DESeq - ChIP-seq (including background reads)
DESeq
DESeq
updated 12.9 years ago by
Gordon Brown
▴ 70 • written 12.9 years ago by
Ian D.
▴ 70
0
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1
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922
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htSeqTools - filtered reads > BED?
IRanges
htSeqTools
IRanges
htSeqTools
updated 12.9 years ago by
Michael Lawrence
★ 11k • written 12.9 years ago by
Ian D.
▴ 70
0
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2
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1.4k
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htSeqTools - naming RangedData objects?
htSeqTools
ASSIGN
htSeqTools
ASSIGN
updated 12.9 years ago by
Michael Lawrence
★ 11k • written 12.9 years ago by
Ian D.
▴ 70
0
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0
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1.5k
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Comment:
C: Using DESeq with ChIP-seq data - all or non-redundant reads?
13.2 years ago
Ian D.
▴ 70
0
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3
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1.5k
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Using DESeq with ChIP-seq data - all or non-redundant reads?
DESeq
DESeq
updated 13.2 years ago by
Ivan Gregoretti
▴ 310 • written 13.2 years ago by
Ian D.
▴ 70
0
votes
1
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2.5k
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Comment:
C: Using DESeq with ChIP-seq data
13.4 years ago
Ian D.
▴ 70
0
votes
4
replies
2.5k
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Using DESeq with ChIP-seq data
DESeq
DESeq
updated 13.4 years ago by
Simon Anders
★ 3.8k • written 13.4 years ago by
Ian D.
▴ 70
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