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Comment: Comment: More regions in union when increasing DBA$config$mergeOverlap
10 days ago Ian D. ▴ 70
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85
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How to create consensus peak sets for each group to use in DiffBind?
DiffBind
16 days ago Ian D. ▴ 70
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2
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371
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Comment: Comment: More regions in union when increasing DBA$config$mergeOverlap
16 days ago Ian D. ▴ 70
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4
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371
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More regions in union when increasing DBA$config$mergeOverlap
DiffBind
updated 6 days ago by • 0 • written 17 days ago by ▴ 70
0
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1
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890
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DESeq - ChIP-seq (including background reads)
DESeq DESeq
updated 12.3 years ago by ▴ 70 • written 12.3 years ago by ▴ 70
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1
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799
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htSeqTools - filtered reads > BED?
IRanges htSeqTools IRanges htSeqTools
updated 12.3 years ago by ★ 11k • written 12.3 years ago by ▴ 70
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2
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1.2k
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htSeqTools - naming RangedData objects?
htSeqTools ASSIGN htSeqTools ASSIGN
updated 12.3 years ago by ★ 11k • written 12.3 years ago by ▴ 70
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0
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1.4k
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Comment: C: Using DESeq with ChIP-seq data - all or non-redundant reads?
12.6 years ago Ian D. ▴ 70
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3
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1.4k
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Using DESeq with ChIP-seq data - all or non-redundant reads?
DESeq DESeq
updated 12.6 years ago by ▴ 310 • written 12.6 years ago by ▴ 70
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1
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2.3k
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Comment: C: Using DESeq with ChIP-seq data
12.8 years ago Ian D. ▴ 70
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4
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2.3k
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Using DESeq with ChIP-seq data
DESeq DESeq
updated 12.8 years ago by ★ 3.7k • written 12.8 years ago by ▴ 70
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