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Comment:
C: Need help loading gene expression data into R using either ArrayExpress or GEOqu
6.1 years ago
Sean Davis
21k
0
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1
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2.0k
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Comment:
C: Need help loading gene expression data into R using either ArrayExpress or GEOqu
6.1 years ago
Sean Davis
21k
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2.8k
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Comment:
C: Invitation to submit articles to the Bioconductor gateway on F1000Research
6.1 years ago
Sean Davis
21k
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543
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Comment:
C: processing deseq2 result
6.1 years ago
Sean Davis
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1.4k
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Comment:
C: Upregulation and Downregulation of Gene Ontology terms
6.1 years ago
Sean Davis
21k
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1.3k
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Comment:
C: GEO2R Gene Expression
6.1 years ago
Sean Davis
21k
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1.3k
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Comment:
C: getGEO Error: Duplicate identifiers for rows
6.2 years ago
Sean Davis
21k
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1
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1.3k
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Comment:
C: getGEO Error: Duplicate identifiers for rows
6.2 years ago
Sean Davis
21k
1
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1
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2.3k
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Comment:
C: Performing differential gene analysis on RT PCR experimental data
6.3 years ago
Sean Davis
21k
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1.1k
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Comment:
C: How to identify Disease biomarkers " DNA sequences as biomarkers "
6.3 years ago
Sean Davis
21k
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1
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2.1k
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Comment:
C: DEGs of microarray Data and hierarchical clustering and visualizing using heatma
6.3 years ago
Sean Davis
21k
1
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2.1k
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Comment:
C: DEGs of microarray Data and hierarchical clustering and visualizing using heatma
6.3 years ago
Sean Davis
21k
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646
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Comment:
C: ExpressionSet annotation with custom annotation file
6.3 years ago
Sean Davis
21k
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3.3k
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Comment:
C: SRAdb: Error downloading sqlite files
6.3 years ago
Sean Davis
21k
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4.0k
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Comment:
C: GEOquery http:// url error
6.3 years ago
Sean Davis
21k
0
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1
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4.0k
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Comment:
C: GEOquery http:// url error
6.3 years ago
Sean Davis
21k
0
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5.0k
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Comment:
C: Patch for GEOquery package error: getGEO Error in download.file, cannot open des
6.3 years ago
Sean Davis
21k
0
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1
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5.0k
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Comment:
C: Patch for GEOquery package error: getGEO Error in download.file, cannot open des
6.3 years ago
Sean Davis
21k
1
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5.0k
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Comment:
C: Patch for GEOquery package error: getGEO Error in download.file, cannot open des
6.3 years ago
Sean Davis
21k
0
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2
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2.7k
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Comment:
C: Problem in installing Bioconductor packages due to "IRanges"
6.3 years ago
Sean Davis
21k
1
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2.4k
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Comment:
C: SummarizedExperiment object from GEOquery obtained GSE
6.3 years ago
Sean Davis
21k
1
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1
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2.4k
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Comment:
C: SummarizedExperiment object from GEOquery obtained GSE
6.3 years ago
Sean Davis
21k
1
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1
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2.4k
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Comment:
C: SummarizedExperiment object from GEOquery obtained GSE
6.3 years ago
Sean Davis
21k
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2.0k
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Comment:
C: Cannot retrieve projects from TCGA using getGDCprojects function
6.4 years ago
Sean Davis
21k
0
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1
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831
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Comment:
C: STATegRa Minimum number of samples
6.4 years ago
Sean Davis
21k
0
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850
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Comment:
C: R version and packages problems
6.4 years ago
Sean Davis
21k
0
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1
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1.2k
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Comment:
C: Unable to load sqlite file generated by Cuffdiff
6.5 years ago
Sean Davis
21k
0
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1
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1.8k
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Comment:
C: Using limma analyze raw data of illumina beadchip
6.5 years ago
Sean Davis
21k
0
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769
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Comment:
C: for loop not working!
6.5 years ago
Sean Davis
21k
0
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1
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1.4k
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Comment:
C: DESeq2 biais when genes are missing from the annotation?
6.5 years ago
Sean Davis
21k
0
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1
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1.4k
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Comment:
C: DESeq2 biais when genes are missing from the annotation?
6.5 years ago
Sean Davis
21k
1
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0
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1.5k
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Comment:
C: How to construct an up-to-date and annotation-rich RangeSummarizedExperiment obj
6.5 years ago
Sean Davis
21k
1
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3.0k
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Comment:
C: Comparing one condition to multiple others using DESeq2 contrasts
6.5 years ago
Sean Davis
21k
0
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0
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2.0k
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Comment:
C: problem with getSRAfile in SRAdb
6.5 years ago
Sean Davis
21k
0
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1
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1.9k
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Comment:
C: DOI for packages
6.5 years ago
Sean Davis
21k
0
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0
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868
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Comment:
C: Trouble with multtest
6.6 years ago
Sean Davis
21k
0
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0
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1.4k
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Comment:
C: GEOquery download error
6.7 years ago
Sean Davis
21k
1
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0
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2.6k
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Comment:
C: Bioconductor packages now each have a DOI.
6.7 years ago
Sean Davis
21k
0
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1
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1.8k
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Comment:
C: Unused argument of reader = read_tsv on R version 3.4.1
6.7 years ago
Sean Davis
21k
1
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0
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2.6k
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Comment:
C: Bioconductor packages now each have a DOI.
6.7 years ago
Sean Davis
21k
0
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0
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2.9k
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Comment:
C: getGEO function not identifying local file
7.1 years ago
Sean Davis
21k
0
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0
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1.2k
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Comment:
C: CollapsedVCF and ExpandedVCF rownames and vcfs with large ref/alt columns
7.4 years ago
Sean Davis
21k
0
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0
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1.2k
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Comment:
C: Reading files from Softlayer Object Storage
7.4 years ago
Sean Davis
21k
0
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1
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1.3k
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Comment:
C: How to start CrispRVariants with fastq file starting point
7.4 years ago
Sean Davis
21k
0
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1
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3.8k
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Comment:
C: GEOquery Fails to Download Series Matrix File
7.5 years ago
Sean Davis
21k
0
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1
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978
views
Comment:
C: Normalizing RNA-Seq data without replicates.
7.9 years ago
Sean Davis
21k
1
vote
1
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9.3k
views
Comment:
C: GEOquery: getGEO() doesn\'t work (error \"invalid \'nlines\' argument\")
8.2 years ago
Sean Davis
21k
0
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0
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1.4k
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Comment:
C: Rsamtools PileupParam set minimum depth to zero
8.2 years ago
Sean Davis
21k
0
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1
reply
1.4k
views
Comment:
C: Rsamtools PileupParam set minimum depth to zero
8.2 years ago
Sean Davis
21k
0
votes
0
replies
7.3k
views
Comment:
C: How do I split GRange object (set of genomic ranges with 2 metadata column) by c
8.3 years ago
Sean Davis
21k
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