Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
0
votes
0
replies
717
views
Comment:
Comment: Generating Gene Expression Levels from TSV files on GEO
6 months ago
Sean Davis
21k
0
votes
1
reply
717
views
Answer:
Answer: Generating Gene Expression Levels from TSV files on GEO
6 months ago
Sean Davis
21k
0
votes
1
reply
809
views
Comment:
Comment: Research Project - Expanding search funtionality on the GEO database
6 months ago
Sean Davis
21k
0
votes
1
reply
809
views
Comment:
Comment: Research Project - Expanding search funtionality on the GEO database
6 months ago
Sean Davis
21k
0
votes
0
replies
809
views
Comment:
Comment: Research Project - Expanding search funtionality on the GEO database
6 months ago
Sean Davis
21k
1
vote
1
reply
1.7k
views
Answer:
Answer: Issues with installing Bioconductor packages (eg GEOquery)
7 months ago
Sean Davis
21k
0
votes
0
replies
1.0k
views
Comment:
Comment: lfcSE always positive. Does this make sense?
12 months ago
Sean Davis
21k
0
votes
0
replies
4.2k
views
Comment:
Comment: strange results from differential methylation analysis using limma
2.7 years ago
Sean Davis
21k
0
votes
1
reply
2.7k
views
Comment:
Comment: GEO series matrix empty
2.9 years ago
Sean Davis
21k
1
vote
1
reply
2.7k
views
Comment:
Comment: GEO series matrix empty
2.9 years ago
Sean Davis
21k
0
votes
0
replies
1.8k
views
Comment:
Comment: Reading large file (15GB) in R
2.9 years ago
Sean Davis
21k
1
vote
1
reply
2.7k
views
Comment:
Comment: GEO series matrix empty
2.9 years ago
Sean Davis
21k
0
votes
1
reply
1.8k
views
Comment:
Comment: Reading large file (15GB) in R
3.0 years ago
Sean Davis
21k
0
votes
1
reply
1.1k
views
Comment:
Comment: Error in loading data set
3.0 years ago
Sean Davis
21k
0
votes
0
replies
1.5k
views
Comment:
Comment: GEOquery returning NAs as probe names
3.0 years ago
Sean Davis
21k
0
votes
1
reply
4.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
3.1 years ago
Sean Davis
21k
0
votes
1
reply
4.5k
views
Comment:
Comment: Installing Bioconductor
3.1 years ago
Sean Davis
21k
0
votes
2
replies
4.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
3.1 years ago
Sean Davis
21k
0
votes
0
replies
3.0k
views
Comment:
Comment: GEO RNASeq data query
3.1 years ago
Sean Davis
21k
0
votes
1
reply
4.7k
views
Answer:
Answer: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
3.1 years ago
Sean Davis
21k
0
votes
1
reply
4.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
3.1 years ago
Sean Davis
21k
0
votes
1
reply
4.7k
views
Comment:
Comment: GEOquery run into problem with Sys.setenv("VROOM_CONNECTION_SIZE")
3.1 years ago
Sean Davis
21k
1
vote
0
replies
1.4k
views
Answer:
Answer: How to obtain clinical data from TCGA via Bioconductor GenomicDataCommons
3.1 years ago
Sean Davis
21k
1
vote
1
reply
1.7k
views
Comment:
Comment: 2 questions: why there is nothing for file_ids? How could I generate a manifest
3.4 years ago
Sean Davis
21k
1
vote
1
reply
1.7k
views
Answer:
Answer: 2 questions: why there is nothing for file_ids? How could I generate a manifest
3.4 years ago
Sean Davis
21k
0
votes
1
reply
6.7k
views
Comment:
Comment: Accessing Public Genomic Data from Bioconductor
3.5 years ago
Sean Davis
21k
0
votes
0
replies
1.9k
views
Answer:
Answer: unable to find an inherited method for function ‘Table’ for signature ‘"GSE"
3.5 years ago
Sean Davis
21k
7
votes
5
replies
6.7k
views
Tutorial:
Accessing Public Genomic Data from Bioconductor
geoquery
geometadb
sradb
Tutorial
written 9.6 years ago by
Sean Davis
21k
0
votes
0
replies
1.7k
views
Comment:
Comment: when using getGEO() from GEOquery, an error happened : a file does not exist
4.0 years ago
Sean Davis
21k
1
vote
0
replies
1.7k
views
Answer:
Answer: when using getGEO() from GEOquery, an error happened : a file does not exist
4.0 years ago
Sean Davis
21k
0
votes
1
reply
1.7k
views
Comment:
Comment: when using getGEO() from GEOquery, an error happened : a file does not exist
4.0 years ago
Sean Davis
21k
0
votes
0
replies
1.7k
views
Comment:
C: GEOquery: preprocessing log of imported data
4.6 years ago
Sean Davis
21k
4
votes
1
reply
1.7k
views
Answer:
A: GEOquery: preprocessing log of imported data
4.6 years ago
Sean Davis
21k
0
votes
1
reply
1.5k
views
Comment:
C: Annotation issue while analyzing processed Affymetrix Human Exon 1.0 ST Arrays f
4.8 years ago
Sean Davis
21k
0
votes
0
replies
1.1k
views
Answer:
A: Annotation Using GEOquery
5.2 years ago
Sean Davis
21k
0
votes
0
replies
1.1k
views
Comment:
C: Annotation Using GEOquery
5.2 years ago
Sean Davis
21k
0
votes
0
replies
1.3k
views
Comment:
C: GEOquery and Feature data
5.2 years ago
Sean Davis
21k
1
vote
0
replies
1.6k
views
Answer:
A: Downloading a private GEO with GEOquery
5.3 years ago
Sean Davis
21k
1
vote
0
replies
1.6k
views
Answer:
A: TCGA MAF (Mutations) data
5.7 years ago
Sean Davis
21k
0
votes
0
replies
3.6k
views
Comment:
C: GEOquery: HTTP error 403
5.7 years ago
Sean Davis
21k
1
vote
0
replies
3.6k
views
Comment:
C: GEOquery: HTTP error 403
5.7 years ago
Sean Davis
21k
0
votes
0
replies
3.6k
views
Comment:
C: GEOquery: HTTP error 403
5.7 years ago
Sean Davis
21k
2
votes
1
reply
1.4k
views
Answer:
A: GenomicDataCommons request timeouts when cases() %>% ... %>% results_all()
6.0 years ago
Sean Davis
21k
0
votes
0
replies
1.6k
views
Comment:
C: edgeR. Known cancer genes are not differentially expressed?
6.1 years ago
Sean Davis
21k
1
vote
1
reply
2.3k
views
Comment:
C: geGeo error - Error in .subset2(x, i) : subscript out of bounds
6.1 years ago
Sean Davis
21k
0
votes
0
replies
1.8k
views
Comment:
C: GEOquery:Get error sampleNames
6.1 years ago
Sean Davis
21k
0
votes
0
replies
1.4k
views
Comment:
C: GEOQuery bug, NCBI or package?
6.1 years ago
Sean Davis
21k
0
votes
1
reply
1.4k
views
Comment:
C: GEOQuery bug, NCBI or package?
6.1 years ago
Sean Davis
21k
0
votes
0
replies
1.8k
views
Comment:
C: GEOquery:Get error sampleNames
6.1 years ago
Sean Davis
21k
0
votes
1
reply
1.8k
views
Comment:
C: GEOquery:Get error sampleNames
6.1 years ago
Sean Davis
21k
2,192 results • Page
1 of 44
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6