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Comment: C: some errors in cytofWorkflow2 description
5.6 years ago Mark Robinson ▴ 880
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Answer: A: edgeR: Problem with subsetting a DGEList in latest package version
9.7 years ago Mark Robinson ▴ 880
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Comment: C: "True" normalization factors in edgeR
9.7 years ago Mark Robinson ▴ 880
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Answer: A: "True" normalization factors in edgeR
9.7 years ago Mark Robinson ▴ 880
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Answer: A: "True" normalization factors in edgeR
9.7 years ago Mark Robinson ▴ 880
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Comment: C: total count filter cutoff
10.0 years ago Mark Robinson ▴ 880
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Comment: C: tagwise parameters for negative binomial distribution in edgeR
10.1 years ago Mark Robinson ▴ 880
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Answer: A: differential expression- edgeR
10.3 years ago Mark Robinson ▴ 880
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Answer: A: differential expression- edgeR
10.3 years ago Mark Robinson ▴ 880
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Answer: A: edgeR glmFit
10.4 years ago Mark Robinson ▴ 880
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6.0k
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Answer: A: edgeR glmFit
10.4 years ago Mark Robinson ▴ 880
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Answer: A: calcNormFactors gives NaN normalization values- Please Help!
10.4 years ago Mark Robinson ▴ 880
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6.0k
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Answer: A: edgeR glmFit
10.4 years ago Mark Robinson ▴ 880
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8.1k
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Answer: A: edgeR DGEList
10.4 years ago Mark Robinson ▴ 880
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8.1k
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Answer: A: edgeR DGEList
10.4 years ago Mark Robinson ▴ 880
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3.8k
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Answer: A: edgeR - 3-dimensional Multidimensional scaling
10.4 years ago Mark Robinson ▴ 880
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2.5k
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Answer: A: confused with edgeR: multiple groups vs one control
10.4 years ago Mark Robinson ▴ 880
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1.6k
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Answer: A: Too many DEG with edgeR output?
10.5 years ago Mark Robinson ▴ 880
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4.5k
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Answer: A: Bioconductor: CPM and log(CPM) values in EdgeR does not match
10.7 years ago Mark Robinson ▴ 880
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2.2k
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Answer: A: edgeR dispersion value
10.8 years ago Mark Robinson ▴ 880
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1.7k
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Answer: A: edgeR: very low p-value and very high variance within the group of replicates
10.9 years ago Mark Robinson ▴ 880
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2.0k
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Answer: A: edgeR - one way ANOVA, coef parameter interpretation in glmLRT()
10.9 years ago Mark Robinson ▴ 880
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1.4k
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Answer: A: Problems with edgeR package
10.9 years ago Mark Robinson ▴ 880
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3.7k
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Answer: A: EdgeR questions about exactTest and plotMDS function
10.9 years ago Mark Robinson ▴ 880
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1.8k
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Comment: C: error with retrieving dn and ds using biomart
11.1 years ago Mark Robinson ▴ 880
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1.4k
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Answer: A: edgeR Warings
11.1 years ago Mark Robinson ▴ 880
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4.6k
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Answer: A: edgeR: counts or pseudo.counts?
11.2 years ago Mark Robinson ▴ 880
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2.8k
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Answer: A: TMM Normalization without replicate
11.2 years ago Mark Robinson ▴ 880
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2.7k
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Answer: A: edgeR continuous variables
11.3 years ago Mark Robinson ▴ 880
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884
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Answer: A: EdgeR :column sums of counts or library size?
11.5 years ago Mark Robinson ▴ 880
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4.2k
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Answer: A: edgeR/DESeq for ChIP-seq analysis
11.5 years ago Mark Robinson ▴ 880
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4.3k
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Answer: A: Is there any prejudice whether to use edgeR or DESeq for differential expression
11.5 years ago Mark Robinson ▴ 880
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908
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Answer: A: DGEList and exactTest function in edgeR package
11.5 years ago Mark Robinson ▴ 880
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2.5k
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Answer: A: Using edgeR with no replicates, estimating dispersion and the pseudo.alt slot
11.5 years ago Mark Robinson ▴ 880
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808
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Answer: A: minimal number of features tested in edgeR
11.5 years ago Mark Robinson ▴ 880
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Comment: C: Data filtering
11.5 years ago Mark Robinson ▴ 880
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1.8k
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Comment: C: EdgeR for proteomics
11.5 years ago Mark Robinson ▴ 880
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Postdoc in Statistical Bioinformatics, Zurich, Switzerland
Sequencing ASSET Sequencing ASSET
11.5 years ago Mark Robinson ▴ 880
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1000
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Answer: A: Fisher Information Matrix in edgeR
11.5 years ago Mark Robinson ▴ 880
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9.9k
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Answer: A: How can I get the normalized read counts from TMM?
11.5 years ago Mark Robinson ▴ 880
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1
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1.8k
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Answer: A: EdgeR for proteomics
11.5 years ago Mark Robinson ▴ 880
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2
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1.7k
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Answer: A: Data filtering
11.5 years ago Mark Robinson ▴ 880
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1.2k
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Answer: A: EdgeR condition-specific dispersion
11.6 years ago Mark Robinson ▴ 880
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966
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Answer: A: how to get normalized matrix
11.6 years ago Mark Robinson ▴ 880
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962
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Answer: A: edgeR - no sequences are differentially expressed
11.6 years ago Mark Robinson ▴ 880
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861
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Euro Bioc Devel 2012 Zurich CH -- Dec 13-14 2012 -- registration open
11.6 years ago Mark Robinson ▴ 880
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1.9k
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Answer: A: Is normalization in edgeR required for small RNA sequencing data?
11.6 years ago Mark Robinson ▴ 880
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2
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2.5k
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counting RNA-seq reads in R/BioC
GO Infrastructure Rsubread easyRNASeq GO Infrastructure Rsubread easyRNASeq
updated 11.6 years ago by ★ 6.8k • written 11.6 years ago by ▴ 880
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1.7k
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Answer: A: Differential expression without replicates
11.7 years ago Mark Robinson ▴ 880
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1
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1.8k
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Comment: C: RNA-seq data simulation
11.7 years ago Mark Robinson ▴ 880
85 results • Page 1 of 2
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