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Comment: Comment: Question about using LRT test for time course experiments with DESeq2
4 weeks ago James W. MacDonald 67k
1
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0
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682
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Comment: Comment: Error: 'term_similarity_from_KEGG' not found in simplifyEnrichment package
4 weeks ago James W. MacDonald 67k
0
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0
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227
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Answer: Answer: edit y axis scale in errBarchart?
4 weeks ago James W. MacDonald 67k
0
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0
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947
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Comment: Comment: How should I know which platforms are available for TCGA methylation?
4 weeks ago James W. MacDonald 67k
0
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0
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253
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Answer: Answer: probe ID search for SNP (plink)
5 weeks ago James W. MacDonald 67k
1
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1
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1.3k
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Answer: Answer: biomaRt rnorvegicus_gene_ensembl not available anymore
5 weeks ago James W. MacDonald 67k
0
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1
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614
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Comment: Comment: Is there a way to allow elements with no IRanges when subsetting an IRangesList
5 weeks ago James W. MacDonald 67k
0
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1
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480
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Answer: Answer: qvalue density function error
5 weeks ago James W. MacDonald 67k
2
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0
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399
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Answer: Answer: clusterProfiler enrichGO on only T-cell related GO terms
6 weeks ago James W. MacDonald 67k
0
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0
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564
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Answer: Answer: Tutorial regarding metabolomics with R
6 weeks ago James W. MacDonald 67k
1
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0
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987
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Comment: Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
6 weeks ago James W. MacDonald 67k
1
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1
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1.6k
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Comment: Comment: Installing annotation package in locally
6 weeks ago James W. MacDonald 67k
1
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0
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393
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Answer: Answer: DataFrame Character Truncation
6 weeks ago James W. MacDonald 67k
0
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1
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1.6k
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Comment: Comment: Installing annotation package in locally
6 weeks ago James W. MacDonald 67k
0
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1
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1.6k
views
Comment: Comment: Installing annotation package in locally
6 weeks ago James W. MacDonald 67k
0
votes
1
reply
987
views
Answer: Answer: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
6 weeks ago James W. MacDonald 67k
0
votes
1
reply
987
views
Comment: Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
6 weeks ago James W. MacDonald 67k
0
votes
1
reply
987
views
Comment: Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
6 weeks ago James W. MacDonald 67k
1
vote
1
reply
1.6k
views
Comment: Comment: Installing annotation package in locally
6 weeks ago James W. MacDonald 67k
0
votes
1
reply
1.6k
views
Comment: Comment: Installing annotation package in locally
6 weeks ago James W. MacDonald 67k
1
vote
1
reply
1.6k
views
Answer: Answer: Installing annotation package in locally
6 weeks ago James W. MacDonald 67k
0
votes
1
reply
454
views
Comment: Comment: Need help converting vcf files to snp
6 weeks ago James W. MacDonald 67k
0
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0
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180
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Answer: Answer: MethylKit CpG Island annotation for Hg38
6 weeks ago James W. MacDonald 67k
0
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1
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454
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Answer: Answer: Need help converting vcf files to snp
6 weeks ago James W. MacDonald 67k
0
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2
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947
views
Comment: Comment: How should I know which platforms are available for TCGA methylation?
6 weeks ago James W. MacDonald 67k
0
votes
1
reply
947
views
Answer: Answer: How should I know which platforms are available for TCGA methylation?
6 weeks ago James W. MacDonald 67k
0
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0
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396
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Comment: Comment: Label specific rows in pheatmap
6 weeks ago James W. MacDonald 67k
0
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0
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222
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Answer: Answer: enrichKEGG
6 weeks ago James W. MacDonald 67k
0
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1
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396
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Answer: Answer: Label specific rows in pheatmap
6 weeks ago James W. MacDonald 67k
0
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0
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454
views
Comment: Comment: Its possible to remove annotation names using anno_simple in ComplexHeatmap
7 weeks ago James W. MacDonald 67k
0
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1
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454
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Answer: Answer: Its possible to remove annotation names using anno_simple in ComplexHeatmap
7 weeks ago James W. MacDonald 67k
1
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1
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291
views
Answer: Answer: How to reverse complement some elements of a DNAStringSet
7 weeks ago James W. MacDonald 67k
1
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1
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244
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Answer: Answer: When running contrasts, does it use normalized read counts?
7 weeks ago James W. MacDonald 67k
0
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0
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327
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Answer: Answer: Need help interpreting heatmaps from limma
7 weeks ago James W. MacDonald 67k
0
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0
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442
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Answer: Answer: featureCounts fails to load annotation file
7 weeks ago James W. MacDonald 67k
0
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0
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859
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Comment: Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
7 weeks ago James W. MacDonald 67k
1
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1
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477
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Comment: Comment: Are transformed values from rlog /vst log2 normalized counts?
7 weeks ago James W. MacDonald 67k
2
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1
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477
views
Answer: Answer: Are transformed values from rlog /vst log2 normalized counts?
7 weeks ago James W. MacDonald 67k
1
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0
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291
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Answer: Answer: How to subset voomLmFit (MArrayLM) object?
7 weeks ago James W. MacDonald 67k
0
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0
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929
views
Comment: Comment: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable
7 weeks ago James W. MacDonald 67k
1
vote
0
replies
351
views
Comment: Comment: How to conduct maSigPro analysis with only one condition?
7 weeks ago James W. MacDonald 67k
1
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1
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351
views
Comment: Comment: How to conduct maSigPro analysis with only one condition?
7 weeks ago James W. MacDonald 67k
1
vote
1
reply
929
views
Answer: Answer: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable
7 weeks ago James W. MacDonald 67k
0
votes
0
replies
473
views
Comment: Comment: dmpFinder for other objects
8 weeks ago James W. MacDonald 67k
1
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0
replies
1.4k
views
Answer: Answer: Removing Effect of Covariate in Only a Subset of Samples in a Model Containing A
8 weeks ago James W. MacDonald 67k
2
votes
1
reply
351
views
Answer: Answer: How to conduct maSigPro analysis with only one condition?
8 weeks ago James W. MacDonald 67k
1
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1
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1.1k
views
Comment: Comment: Annotation for EPICv2
8 weeks ago James W. MacDonald 67k
1
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1
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1.1k
views
Answer: Answer: Annotation for EPICv2
8 weeks ago James W. MacDonald 67k
1
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1
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473
views
Comment: Comment: dmpFinder for other objects
8 weeks ago James W. MacDonald 67k
1
vote
1
reply
473
views
Answer: Answer: dmpFinder for other objects
8 weeks ago James W. MacDonald 67k
8,682 results • Page 2 of 174
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