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Comment:
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
13 months ago
James W. MacDonald
68k
1
vote
0
replies
475
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Answer:
Answer: Detecting genomic signatures of drug resistance breast cancer in transcriptom
13 months ago
James W. MacDonald
68k
1
vote
1
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2.1k
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Comment:
Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
13 months ago
James W. MacDonald
68k
1
vote
1
reply
2.1k
views
Answer:
Answer: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
13 months ago
James W. MacDonald
68k
0
votes
0
replies
603
views
Answer:
Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di
13 months ago
James W. MacDonald
68k
1
vote
0
replies
726
views
Answer:
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification
13 months ago
James W. MacDonald
68k
0
votes
0
replies
427
views
Answer:
Answer: HilBertVis install error
13 months ago
James W. MacDonald
68k
1
vote
1
reply
509
views
Answer:
Answer: Differene between the Wald and LRT test for time-series gene expression data
13 months ago
James W. MacDonald
68k
0
votes
1
reply
1.0k
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Comment:
Comment: Handling Epic Array Data
13 months ago
James W. MacDonald
68k
1
vote
1
reply
1.0k
views
Answer:
Answer: Handling Epic Array Data
13 months ago
James W. MacDonald
68k
2
votes
1
reply
819
views
Answer:
Answer: preprocessIllumina error with EPICv2 array
13 months ago
James W. MacDonald
68k
1
vote
0
replies
369
views
Answer:
Answer: UniProt.ws query loading indefinitely
13 months ago
James W. MacDonald
68k
0
votes
0
replies
988
views
Comment:
Comment: Package needs internet access
13 months ago
James W. MacDonald
68k
1
vote
2
replies
988
views
Answer:
Answer: Package needs internet access
13 months ago
James W. MacDonald
68k
0
votes
1
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988
views
Comment:
Comment: Package needs internet access
13 months ago
James W. MacDonald
68k
2
votes
0
replies
1.4k
views
Answer:
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
13 months ago
James W. MacDonald
68k
1
vote
1
reply
529
views
Answer:
Answer: Limma Interaction Effect with Covariates
13 months ago
James W. MacDonald
68k
2
votes
0
replies
551
views
Answer:
Answer: Using Affymetrix Custom Array
13 months ago
James W. MacDonald
68k
0
votes
0
replies
539
views
Answer:
Answer: Harmonizing Gene Annotations for Meta-Analysis of GSE68183 and GSE80178
13 months ago
James W. MacDonald
68k
0
votes
0
replies
695
views
Answer:
Answer: How to get The evolutionary conservation scores for lncRNAs by the phastCons100w
13 months ago
James W. MacDonald
68k
1
vote
0
replies
1.4k
views
Answer:
Answer: [How to construct a model.matrix ]
13 months ago
James W. MacDonald
68k
0
votes
0
replies
2.8k
views
Comment:
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
13 months ago
James W. MacDonald
68k
1
vote
1
reply
2.8k
views
Comment:
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
13 months ago
James W. MacDonald
68k
0
votes
1
reply
2.8k
views
Comment:
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
14 months ago
James W. MacDonald
68k
0
votes
2
replies
2.6k
views
Comment:
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
14 months ago
James W. MacDonald
68k
0
votes
1
reply
2.6k
views
Comment:
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
14 months ago
James W. MacDonald
68k
0
votes
1
reply
2.6k
views
Answer:
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
14 months ago
James W. MacDonald
68k
0
votes
1
reply
1.0k
views
Answer:
Answer: GOstats kegg analysis in wheat - help - none of the objects in the first column
14 months ago
James W. MacDonald
68k
0
votes
1
reply
2.6k
views
Comment:
Comment: Question about using LRT test for time course experiments with DESeq2
14 months ago
James W. MacDonald
68k
0
votes
1
reply
2.6k
views
Comment:
Comment: Question about using LRT test for time course experiments with DESeq2
14 months ago
James W. MacDonald
68k
0
votes
0
replies
923
views
Answer:
Answer: single cell RNA seq pseudobulk batch correction
14 months ago
James W. MacDonald
68k
0
votes
0
replies
939
views
Answer:
Answer: Normalized counts to be used in decoupleR from deseq2 results
14 months ago
James W. MacDonald
68k
1
vote
1
reply
2.8k
views
Comment:
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
14 months ago
James W. MacDonald
68k
0
votes
1
reply
2.8k
views
Answer:
Answer: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
14 months ago
James W. MacDonald
68k
0
votes
0
replies
986
views
Comment:
Comment: Why are internal functions in the package manual?
14 months ago
James W. MacDonald
68k
0
votes
1
reply
986
views
Comment:
Comment: Why are internal functions in the package manual?
14 months ago
James W. MacDonald
68k
0
votes
1
reply
986
views
Comment:
Comment: Why are internal functions in the package manual?
14 months ago
James W. MacDonald
68k
0
votes
1
reply
986
views
Comment:
Comment: Why are internal functions in the package manual?
14 months ago
James W. MacDonald
68k
0
votes
1
reply
986
views
Answer:
Answer: Why are internal functions in the package manual?
14 months ago
James W. MacDonald
68k
0
votes
1
reply
2.6k
views
Comment:
Comment: Question about using LRT test for time course experiments with DESeq2
14 months ago
James W. MacDonald
68k
1
vote
0
replies
1.1k
views
Comment:
Comment: Error: 'term_similarity_from_KEGG' not found in simplifyEnrichment package
14 months ago
James W. MacDonald
68k
0
votes
0
replies
444
views
Answer:
Answer: edit y axis scale in errBarchart?
14 months ago
James W. MacDonald
68k
0
votes
0
replies
1.6k
views
Comment:
Comment: How should I know which platforms are available for TCGA methylation?
14 months ago
James W. MacDonald
68k
0
votes
0
replies
683
views
Answer:
Answer: probe ID search for SNP (plink)
14 months ago
James W. MacDonald
68k
1
vote
1
reply
3.0k
views
Answer:
Answer: biomaRt rnorvegicus_gene_ensembl not available anymore
14 months ago
James W. MacDonald
68k
0
votes
1
reply
1.1k
views
Comment:
Comment: Is there a way to allow elements with no IRanges when subsetting an IRangesList
14 months ago
James W. MacDonald
68k
0
votes
1
reply
884
views
Answer:
Answer: qvalue density function error
14 months ago
James W. MacDonald
68k
2
votes
0
replies
946
views
Answer:
Answer: clusterProfiler enrichGO on only T-cell related GO terms
14 months ago
James W. MacDonald
68k
0
votes
0
replies
1.3k
views
Answer:
Answer: Tutorial regarding metabolomics with R
14 months ago
James W. MacDonald
68k
1
vote
0
replies
1.6k
views
Comment:
Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
14 months ago
James W. MacDonald
68k
8,870 results • Page
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