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Comment: Comment: Discrepancy between Excel TPP-TR reported values and the Melt Curve reported val
4 days ago James W. MacDonald 68k
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Comment: Comment: Conumee2 - CNV.summaryplot()
12 days ago James W. MacDonald 68k
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Comment: Comment: Group-specific condition effects with individuals nested: matrix is not full ra
18 days ago James W. MacDonald 68k
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Comment: Comment: For some reason I can't update BiocManager to 3.20
4 weeks ago James W. MacDonald 68k
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Comment: Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
7 weeks ago James W. MacDonald 68k
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Comment: Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
8 weeks ago James W. MacDonald 68k
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Comment: Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
8 weeks ago James W. MacDonald 68k
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1.2k
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Comment: Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?
8 weeks ago James W. MacDonald 68k
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660
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Comment: Comment: Error using useMart or useEnsembl
8 weeks ago James W. MacDonald 68k
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747
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Comment: Comment: Biomart and ensembl not working?
8 weeks ago James W. MacDonald 68k
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481
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Comment: Comment: iam not able to do retrive data using GEOquery R package
9 weeks ago James W. MacDonald 68k
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871
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Comment: Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
9 weeks ago James W. MacDonald 68k
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871
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Comment: Comment: Different annotation packages (org.Mm.eg.db, EnsDb.Mmusculus.v79, BiomaRt) retu
9 weeks ago James W. MacDonald 68k
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Comment: Comment: Why did PCA plots look exactly the same after adjusting for batch covariate in D
9 weeks ago James W. MacDonald 68k
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Comment: Comment: Deseq2, enrichGO and ensembl ID
9 weeks ago James W. MacDonald 68k
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331
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Comment: Comment: Newbie Question - adding metadata to an analysis
9 weeks ago James W. MacDonald 68k
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670
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Comment: Comment: How do I fix an odd voom plot in a combined dataset?
9 weeks ago James W. MacDonald 68k
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353
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Comment: Comment: MissMethyl failed to use gometh function for EPICv2
9 weeks ago James W. MacDonald 68k
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942
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Comment: Comment: Normalizing batch effects using technical replicates for DGE analysis between tw
12 weeks ago James W. MacDonald 68k
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942
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Comment: Comment: Normalizing batch effects using technical replicates for DGE analysis between tw
12 weeks ago James W. MacDonald 68k
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2.2k
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Comment: Comment: nightmare to make custom txdb for genomes from ToxoDB
12 weeks ago James W. MacDonald 68k
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661
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Comment: Comment: Deseq2 Design
3 months ago James W. MacDonald 68k
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2.1k
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Comment: Comment: biomaRt rnorvegicus_gene_ensembl not available anymore
3 months ago James W. MacDonald 68k
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661
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Comment: Comment: Deseq2 Design
3 months ago James W. MacDonald 68k
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690
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Comment: Comment: Help using rtracklayer for gene ID extraction
3 months ago James W. MacDonald 68k
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506
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Comment: Comment: DESeq2 - Comparing Comparisons
3 months ago James W. MacDonald 68k
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573
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Comment: Comment: Can we get beta values with DMRcate package
3 months ago James W. MacDonald 68k
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1.3k
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Comment: Comment: How to annotate a limma Elist raw class object with an annotation file
3 months ago James W. MacDonald 68k
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1.1k
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Comment: Comment: Differential Expression Genes as Independent Variables
3 months ago James W. MacDonald 68k
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1.1k
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Comment: Comment: Differential Expression Genes as Independent Variables
3 months ago James W. MacDonald 68k
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628
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Comment: Comment: Deseq2 res Function
3 months ago James W. MacDonald 68k
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532
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Comment: Comment: Help with RSEM counts: do I transpose matrix?
3 months ago James W. MacDonald 68k
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Comment: Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
3 months ago James W. MacDonald 68k
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1.1k
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Comment: Comment: Issues with BSgenome.Mmusculus.UCSC.mm39 and generating motif matrix in Signac (
3 months ago James W. MacDonald 68k
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562
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Comment: Comment: Handling Epic Array Data
3 months ago James W. MacDonald 68k
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575
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Comment: Comment: Package needs internet access
3 months ago James W. MacDonald 68k
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575
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Comment: Comment: Package needs internet access
3 months ago James W. MacDonald 68k
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago James W. MacDonald 68k
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago James W. MacDonald 68k
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago James W. MacDonald 68k
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2
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1.6k
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Comment: Comment: Combining RNAseq and microarray data using edgeR/limma-voom
4 months ago James W. MacDonald 68k
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1.6k
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Comment: Comment: Combining RNAseq and microarray data using edgeR/limma-voom
4 months ago James W. MacDonald 68k
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1.6k
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Comment: Comment: Question about using LRT test for time course experiments with DESeq2
4 months ago James W. MacDonald 68k
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1.6k
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Comment: Comment: Question about using LRT test for time course experiments with DESeq2
4 months ago James W. MacDonald 68k
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1.9k
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Comment: Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
4 months ago James W. MacDonald 68k
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569
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Comment: Comment: Why are internal functions in the package manual?
4 months ago James W. MacDonald 68k
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569
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Comment: Comment: Why are internal functions in the package manual?
4 months ago James W. MacDonald 68k
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569
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Comment: Comment: Why are internal functions in the package manual?
4 months ago James W. MacDonald 68k
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569
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Comment: Comment: Why are internal functions in the package manual?
4 months ago James W. MacDonald 68k
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1.6k
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Comment: Comment: Question about using LRT test for time course experiments with DESeq2
4 months ago James W. MacDonald 68k
3,274 results • Page 1 of 66
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