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Comment: Comment: Extremely small p-values using Limma for proteomic data
9 days ago James W. MacDonald 65k
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470
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Comment: Comment: Extremely small p-values using Limma for proteomic data
10 days ago James W. MacDonald 65k
1
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298
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Comment: Comment: Help with running egsea()
13 days ago James W. MacDonald 65k
1
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1
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298
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Comment: Comment: Help with running egsea()
13 days ago James W. MacDonald 65k
0
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297
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Comment: Comment: Once again a "Model matrix not full rank"
16 days ago James W. MacDonald 65k
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1
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297
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Comment: Comment: Once again a "Model matrix not full rank"
17 days ago James W. MacDonald 65k
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2.8k
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Comment: Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i
17 days ago James W. MacDonald 65k
1
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287
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Comment: Comment: Store output of matchPWM()
18 days ago James W. MacDonald 65k
1
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266
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Comment: Comment: Help with error using camera() in limma
19 days ago James W. MacDonald 65k
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282
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Comment: Comment: Assist me in determining whether the analysis process using the limma package ha
19 days ago James W. MacDonald 65k
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265
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Comment: Comment: Minfi - estimatecellscount
20 days ago James W. MacDonald 65k
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1
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359
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Comment: Comment: Math expression in shapeCustom legend in EnhancedVolcano
24 days ago James W. MacDonald 65k
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1
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359
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Comment: Comment: Math expression in shapeCustom legend in EnhancedVolcano
24 days ago James W. MacDonald 65k
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1
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359
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Comment: Comment: Math expression in shapeCustom legend in EnhancedVolcano
24 days ago James W. MacDonald 65k
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1
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359
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Comment: Comment: Math expression in shapeCustom legend in EnhancedVolcano
24 days ago James W. MacDonald 65k
0
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427
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Comment: Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
24 days ago James W. MacDonald 65k
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1
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427
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Comment: Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
24 days ago James W. MacDonald 65k
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259
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Comment: Comment: How to retrieve gene ontology GO class from gene list?
24 days ago James W. MacDonald 65k
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2
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427
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Comment: Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
24 days ago James W. MacDonald 65k
1
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1
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359
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Comment: Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
24 days ago James W. MacDonald 65k
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311
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Comment: Comment: get BM error
25 days ago James W. MacDonald 65k
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325
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Comment: Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
25 days ago James W. MacDonald 65k
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1
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259
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Comment: Comment: How to retrieve gene ontology GO class?
26 days ago James W. MacDonald 65k
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1
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325
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Comment: Comment: Error for AnnotationForge makeOrgPackageFromNCBI function
26 days ago James W. MacDonald 65k
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286
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Comment: Comment: Error EPICv2 ChAMP
27 days ago James W. MacDonald 65k
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178
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Comment: Comment: Error retrieving ensembl gene id using biomaRt...
4 weeks ago James W. MacDonald 65k
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137
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Comment: Comment: what is the sampleFiles
4 weeks ago James W. MacDonald 65k
1
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1.1k
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Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
5 weeks ago James W. MacDonald 65k
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1.1k
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Comment: Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
5 weeks ago James W. MacDonald 65k
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524
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Comment: Comment: GSVA on separate healthy and disease datasets
5 weeks ago James W. MacDonald 65k
1
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1
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462
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Comment: Comment: Not fully paired differential gene expression analysis
5 weeks ago James W. MacDonald 65k
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1
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479
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Comment: Comment: Obtaining pheno data from CEL files
5 weeks ago James W. MacDonald 65k
1
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282
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Comment: Comment: Lib sizes in the DGE object are different from original lib sizes
6 weeks ago James W. MacDonald 65k
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1
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331
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Comment: Comment: Help with design.matrix
6 weeks ago James W. MacDonald 65k
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183
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Comment: Comment: What to the log 2 fold changes mean using LRT on time course in DESeq2
6 weeks ago James W. MacDonald 65k
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1
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459
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Comment: Comment: DESeq2 step-by-step Normalization then DGE separately & Normalization methods an
6 weeks ago James W. MacDonald 65k
0
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479
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Comment: Comment: Obtaining pheno data from CEL files
6 weeks ago James W. MacDonald 65k
0
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371
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Comment: Comment: unable to access Annotationhub latest record
6 weeks ago James W. MacDonald 65k
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1
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479
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Comment: Comment: Obtaining pheno data from CEL files
6 weeks ago James W. MacDonald 65k
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176
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Comment: Comment: No output from read.bismark with bismark cov.files
6 weeks ago James W. MacDonald 65k
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2
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440
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Comment: Comment: Internet connection for Bioconductor packages in Rstudio in Iran...
6 weeks ago James W. MacDonald 65k
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1
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440
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Comment: Comment: Internet connection for Bioconductor packages in Rstudio in Iran...
6 weeks ago James W. MacDonald 65k
0
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371
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Comment: Comment: fgsea fork
7 weeks ago James W. MacDonald 65k
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564
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Comment: Comment: Microarray Limma Model fitting and DEG
7 weeks ago James W. MacDonald 65k
2
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456
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Comment: Comment: Function 'sexp_as_cholmod_sparse' doesn't exist in the package 'Matrix'
7 weeks ago James W. MacDonald 65k
0
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0
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481
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Comment: Comment: Batch Effect Correction, Gene Filtering
8 weeks ago James W. MacDonald 65k
2
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481
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Comment: Comment: Batch Effect Correction, Gene Filtering
8 weeks ago James W. MacDonald 65k
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1.2k
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Comment: Comment: Issue with Biomart- cannot access ensembl
8 weeks ago James W. MacDonald 65k
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1
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413
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Comment: Comment: Unable to annotate ExpressionSet object from hugene11st chip
8 weeks ago James W. MacDonald 65k
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1
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460
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Comment: Comment: DESeq2 filtering vs edgeR filtering
9 weeks ago James W. MacDonald 65k
3,105 results • Page 1 of 63
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