Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
0
votes
0
replies
861
views
Answer: Answer: GENESIS: error in crossprod
2.1 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.3k
views
Answer: Answer: GENESIS: Can not use GdsGenotypeReader to read a gds file
2.3 years ago Stephanie M. Gogarten ▴ 890
1
vote
1
reply
1.3k
views
Answer: Answer: Help for SeqVarData function
2.6 years ago Stephanie M. Gogarten ▴ 890
1
vote
1
reply
1.6k
views
Answer: Answer: assocTestSingle output with GxE
2.7 years ago Stephanie M. Gogarten ▴ 890
1
vote
1
reply
1.7k
views
Answer: Answer: Question about GWASTools gdsSubset
3.1 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
2.2k
views
Answer: Answer: Add GP values to VCF
3.2 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.3k
views
Answer: Answer: kinToMatrix creates an empty matrix (except for diagonal 0.5 values)
3.4 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.7k
views
Answer: Answer: How to project a new vector onto PCA space using snpgdsPCA( )?
4.0 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
2.1k
views
Answer: Answer: SNP annotation
4.1 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.4k
views
Answer: Answer: Approximations to Est and Est.SE in GENESIS
5.2 years ago Stephanie M. Gogarten ▴ 890
0
votes
2
replies
2.5k
views
Answer: A: Alternate allele for GENESIS?
5.5 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.2k
views
Answer: A: using GENESIS R package with non-human species
5.6 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
1.5k
views
Answer: A: Association testing model in GENESIS
5.7 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.9k
views
Answer: A: GENESIS multiple gds files
5.7 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
2.3k
views
Answer: A: How to imports DS field from VCF files with SeqArray seqVCF2GDS()
5.8 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
1.2k
views
Answer: A: Does GENESIS match scan IDs for genotype and phenotype data?
6.1 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
2.3k
views
Answer: A: SeqVarData Error sample.id in sampleData does not match GDS file
6.2 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
1.3k
views
Answer: A: Why did the Wald test disappear from GENESIS?
6.3 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
1.5k
views
Answer: A: Calculating the z score from wald test association results in GENESIS
6.4 years ago Stephanie M. Gogarten ▴ 890
2
votes
2
replies
2.4k
views
Answer: A: Interpreting the output of score test using GENESIS
6.4 years ago Stephanie M. Gogarten ▴ 890
1
vote
1
reply
1.7k
views
Answer: A: Sporadic missingness with admixmmap
6.5 years ago Stephanie M. Gogarten ▴ 890
1
vote
1
reply
2.0k
views
Answer: A: seqVCF2GDS Error Converting VCF to GDS file
6.6 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
1.8k
views
Answer: A: GENESIS: ascertainment in GWAS
6.6 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
2.2k
views
Answer: A: sample ids not matching when creating SeqVarData object
6.6 years ago Stephanie M. Gogarten ▴ 890
2
votes
2
replies
4.0k
views
Answer: A: Genesis: doubts with admixMAPMM
6.9 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
2.3k
views
Answer: A: VCF file does not include snp.id, can I still run SNPRelate for Relatedness Anal
6.9 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.4k
views
Answer: A: betas for binary outcome
6.9 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
1.5k
views
Answer: A: PCA axis description SNPRelate
7.0 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
3.7k
views
Answer: A: GENESIS pcrelate() write gds file doesn't work
7.0 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
2.4k
views
Answer: A: Imputed dosages in GENESIS
7.1 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
1.5k
views
Answer: A: GENESIS pcrelate() to load gds file and continue where the function broke
7.4 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
2.4k
views
Answer: A: Imputed dosages in GENESIS
7.4 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.4k
views
Answer: A: Using previously calculated PCs in GENESIS
7.5 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
2.1k
views
Answer: A: Seq Array converting VCF to GDS using seqVCF2GDS, unable to find file problems w
7.6 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.2k
views
Answer: A: selecting SNPs and samples in GENESIS
7.6 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
2.8k
views
Answer: A: GENESIS: king2mat: subscript out of bounds
7.8 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.3k
views
Answer: A: GWASTools vcfWrite function
7.8 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
3.0k
views
Answer: A: how to save subsetted GDS file
7.8 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
2.3k
views
Answer: A: Error converting vcf to gds
8.0 years ago Stephanie M. Gogarten ▴ 890
1
vote
0
replies
1.2k
views
Answer: A: Missing normalized x, normalized y, baf and logrrratio values
8.0 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
2.8k
views
Answer: A: SeqArray_1.19.2, SeqArray::info() for example gds data does not return correct c
8.2 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
2.2k
views
Answer: A: Question on 'gdsSubset' function
8.4 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
2.5k
views
Answer: A: Creating Intensity GDS file for the R package GWAStools
8.6 years ago Stephanie M. Gogarten ▴ 890
0
votes
1
reply
3.3k
views
Answer: A: Error using readVcf
8.7 years ago Stephanie M. Gogarten ▴ 890
1
vote
1
reply
2.8k
views
Answer: A: "set genotype" function for gds?
9.1 years ago Stephanie M. Gogarten ▴ 890
3
votes
1
reply
5.2k
views
Answer: A: GWAS analysis with Illumina HumanOmni5-4 BeadChip - recommended software and wor
9.8 years ago Stephanie M. Gogarten ▴ 890
0
votes
0
replies
1.4k
views
Answer: A: Using custom expected R to estimate LRR with GWASTools
10.1 years ago Stephanie M. Gogarten ▴ 890
2
votes
0
replies
2.3k
views
Answer: A: Meaning of NA for LRR and BAF values estimated with GWASTools
10.3 years ago Stephanie M. Gogarten ▴ 890
2
votes
0
replies
1.7k
views
Answer: A: genotypeToSnpMatrix doesn't handle PL
10.3 years ago Stephanie M. Gogarten ▴ 890
2
votes
1
reply
2.1k
views
Answer: A: Importing affymetrix genotype calls with GWASTools
10.4 years ago Stephanie M. Gogarten ▴ 890
76 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6