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80
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Approximations to Est and Est.SE in GENESIS
GENESIS
4 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
80
views
Answer:
Answer: Approximations to Est and Est.SE in GENESIS
4 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
68
views
X chromosome analyses for males in GENESIS
GENESIS
5 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
195
views
Comment:
C: Alternate allele for GENESIS?
7 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
195
views
Comment:
C: Alternate allele for GENESIS?
7 months ago
Stephanie M. Gogarten
▴ 800
0
votes
2
replies
195
views
Answer:
A: Alternate allele for GENESIS?
7 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
83
views
using GENESIS R package with non-human species
genesis
gwastools
8 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
83
views
Answer:
A: using GENESIS R package with non-human species
8 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
115
views
Answer:
A: Association testing model in GENESIS
9 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
137
views
Answer:
A: GENESIS multiple gds files
10 months ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
114
views
Answer:
A: How to imports DS field from VCF files with SeqArray seqVCF2GDS()
10 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
395
views
Comment:
C: Why is assocTestMM running with only a fraction of SNPs in genotype data?
13 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
870
views
Comment:
C: GWASTools for analyzing Canine_HD genotyping data
14 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
240
views
Comment:
C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
14 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
240
views
Comment:
C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
14 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
240
views
Comment:
C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
14 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
240
views
Comment:
C: Question: GENESIS: assocTestSingle() is not giving any output; guessing that it
14 months ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
86
views
Answer:
A: Does GENESIS match scan IDs for genotype and phenotype data?
14 months ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
292
views
Answer:
A: SeqVarData Error sample.id in sampleData does not match GDS file
15 months ago
Stephanie M. Gogarten
▴ 800
2
votes
1
reply
173
views
Why did the Wald test disappear from GENESIS?
genesis
17 months ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
173
views
Answer:
A: Why did the Wald test disappear from GENESIS?
17 months ago
Stephanie M. Gogarten
▴ 800
1
vote
1
reply
199
views
Comment:
C: Sporadic missingness with admixmmap
18 months ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
165
views
Answer:
A: Calculating the z score from wald test association results in GENESIS
18 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
211
views
Comment:
C: Interpreting the output of score test using GENESIS
18 months ago
Stephanie M. Gogarten
▴ 800
2
votes
2
replies
211
views
Answer:
A: Interpreting the output of score test using GENESIS
18 months ago
Stephanie M. Gogarten
▴ 800
1
vote
1
reply
199
views
Answer:
A: Sporadic missingness with admixmmap
19 months ago
Stephanie M. Gogarten
▴ 800
1
vote
1
reply
222
views
Answer:
A: seqVCF2GDS Error Converting VCF to GDS file
20 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
315
views
Answer:
A: GENESIS: ascertainment in GWAS
21 months ago
Stephanie M. Gogarten
▴ 800
1
vote
1
reply
332
views
Comment:
C: sample ids not matching when creating SeqVarData object
21 months ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
332
views
Answer:
A: sample ids not matching when creating SeqVarData object
21 months ago
Stephanie M. Gogarten
▴ 800
2
votes
4
replies
332
views
sample ids not matching when creating SeqVarData object
seqvartools
21 months ago
Stephanie M. Gogarten
▴ 800
1
vote
1
reply
1.1k
views
Comment:
C: Genesis: doubts with admixMAPMM
23 months ago
Stephanie M. Gogarten
▴ 800
1
vote
1
reply
1.1k
views
Comment:
C: Genesis: doubts with admixMAPMM
24 months ago
Stephanie M. Gogarten
▴ 800
1
vote
2
replies
1.1k
views
Comment:
C: Genesis: doubts with admixMAPMM
24 months ago
Stephanie M. Gogarten
▴ 800
2
votes
2
replies
1.1k
views
Answer:
A: Genesis: doubts with admixMAPMM
24 months ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
305
views
Answer:
A: VCF file does not include snp.id, can I still run SNPRelate for Relatedness Anal
2.0 years ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
245
views
Answer:
A: betas for binary outcome
2.0 years ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
245
views
betas for binary outcome
genesis
2.0 years ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
211
views
Answer:
A: PCA axis description SNPRelate
2.1 years ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
440
views
Comment:
C: GENESIS pcrelate() write gds file doesn't work
2.1 years ago
Stephanie M. Gogarten
▴ 800
0
votes
3
replies
440
views
Comment:
C: GENESIS pcrelate() write gds file doesn't work
2.1 years ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
440
views
Comment:
C: GENESIS pcrelate() write gds file doesn't work
2.1 years ago
Stephanie M. Gogarten
▴ 800
0
votes
0
replies
304
views
Comment:
C: SeqArray problem in seqVCF2GDS and convert back to vcf
2.1 years ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
440
views
Answer:
A: GENESIS pcrelate() write gds file doesn't work
2.1 years ago
Stephanie M. Gogarten
▴ 800
4
votes
2
replies
568
views
Imputed dosages in GENESIS
genesis
gwastools
seqarray
2.5 years ago • updated 2.2 years ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
568
views
Answer:
A: Imputed dosages in GENESIS
2.2 years ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
339
views
Answer:
A: GENESIS pcrelate() to load gds file and continue where the function broke
2.5 years ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
581
views
Comment:
C: GENESIS: king2mat: subscript out of bounds
2.5 years ago
Stephanie M. Gogarten
▴ 800
0
votes
1
reply
581
views
Comment:
C: GENESIS: king2mat: subscript out of bounds
2.5 years ago
Stephanie M. Gogarten
▴ 800
1
vote
0
replies
568
views
Answer:
A: Imputed dosages in GENESIS
2.5 years ago
Stephanie M. Gogarten
▴ 800
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