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Comment: C: tagwise parameters for negative binomial distribution in edgeR
10.1 years ago Cittaro Davide ▴ 240
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Comment: C: tagwise parameters for negative binomial distribution in edgeR
10.1 years ago Cittaro Davide ▴ 240
0
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1
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2.0k
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Comment: C: tagwise parameters for negative binomial distribution in edgeR
10.1 years ago Cittaro Davide ▴ 240
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9
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2.0k
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tagwise parameters for negative binomial distribution in edgeR
edgeR edgeR
updated 10.1 years ago by 50k • written 10.1 years ago by ▴ 240
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3.9k
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Comment: C: DEseq for chip-seq data normalisation
10.5 years ago Cittaro Davide ▴ 240
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3.9k
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Comment: C: [DESeq] p-value vs adjusted p-value
10.9 years ago Cittaro Davide ▴ 240
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3.9k
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Comment: C: [DESeq] p-value vs adjusted p-value
10.9 years ago Cittaro Davide ▴ 240
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1.7k
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cpm on normalised counts (was "DESeq normalisation strategy")
Normalization edgeR DESeq Normalization edgeR DESeq
10.9 years ago Cittaro Davide ▴ 240
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Comment: C: DESeq normalisation strategy
10.9 years ago Cittaro Davide ▴ 240
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2
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1.9k
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DESeq normalisation strategy
Normalization DESeq Normalization DESeq
updated 10.9 years ago by ★ 3.7k • written 10.9 years ago by ▴ 240
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4.6k
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Comment: C: edgeR: counts or pseudo.counts?
11.2 years ago Cittaro Davide ▴ 240
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2
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4.6k
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edgeR: counts or pseudo.counts?
edgeR edgeR
updated 11.2 years ago by ▴ 880 • written 11.2 years ago by ▴ 240
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0
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859
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Generalized edgeR functions
edgeR edgeR
11.2 years ago Cittaro Davide ▴ 240
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2.1k
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Comment: C: statistical test for time course data
11.2 years ago Cittaro Davide ▴ 240
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1
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1.8k
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limma-voom and y$E
Normalization limma PROcess Normalization limma PROcess
updated 11.2 years ago by 50k • written 11.2 years ago by ▴ 240
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2.1k
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Comment: C: statistical test for time course data
11.2 years ago Cittaro Davide ▴ 240
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2
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1.4k
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What does this mean in Limma?
limma limma
updated 11.2 years ago by 50k • written 11.2 years ago by ▴ 240
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Comment: C: What does this mean in Limma?
11.2 years ago Cittaro Davide ▴ 240
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7
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4.2k
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edgeR/DESeq for ChIP-seq analysis
edgeR DESeq edgeR DESeq
updated 11.5 years ago by 50k • written 11.5 years ago by ▴ 240
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4.2k
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Comment: C: edgeR/DESeq for ChIP-seq analysis
11.5 years ago Cittaro Davide ▴ 240
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1
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4.2k
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Comment: C: edgeR/DESeq for ChIP-seq analysis
11.5 years ago Cittaro Davide ▴ 240
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0
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812
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Comment: C: A doubt with contrasts in limma
11.7 years ago Cittaro Davide ▴ 240
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2
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812
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A doubt with contrasts in limma
updated 11.7 years ago by 65k • written 11.7 years ago by ▴ 240
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3
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1.1k
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Counting reads for edgeR or voom()
edgeR edgeR
updated 11.8 years ago by ★ 3.6k • written 11.8 years ago by ▴ 240
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