Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
427
views
Answer: Answer: clusterProfiler enrichGO on only T-cell related GO terms
8 weeks ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
696
views
Answer: Answer: Why `FoldEnrichment`,`RichFactor`and `zScore` are not in the ReactomePA::enrichP
8 weeks ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.3k
views
Comment: Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs
8 months ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
1.6k
views
Comment: Comment: plot enrichment results
18 months ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
1.6k
views
Comment: Comment: plot enrichment results
18 months ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.1k
views
Comment: Comment: Treeplot by enrichplot
2.2 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
4.2k
views
Answer: Answer: how to color specific node or gene symbol from cnetplot ?
2.3 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.9k
views
Answer: Answer: Plot terms with a NES < 0 GSEA results from gseGO
2.7 years ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
1.4k
views
Answer: A: How can I use 'geom_taxalink()' with the circular layout in the 'ggtree' package
4.5 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
3.0k
views
Answer: A: Adding Enrichresults for creating plot
4.7 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
4.6k
views
Answer: A: How to modify label text size/line width in cnetplot (ReactomePA/clusterProfiler
4.8 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
4.0k
views
Comment: C: Unable to reroot RAxML tree with ggtree
5.0 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.4k
views
Answer: A: DO.db is missing after repeated installations-ReactomePA-ClusterProfiler-DOSE
5.1 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
3.8k
views
Comment: C: gseDO function input
5.2 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.6k
views
Answer: C: Is it possible to run gseDO for mouse 'org.Mm.eg.db'
5.2 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.8k
views
Comment: C: clusterProfiler: BgRatio N value does not equal set gene universe size
5.2 years ago Guangchuang Yu ★ 1.2k
1
vote
3
replies
2.8k
views
Answer: A: clusterProfiler: BgRatio N value does not equal set gene universe size
5.2 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.2k
views
Comment: C: how to add background gene set to enrichMesh
5.4 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.7k
views
Answer: A: Highligting specific tips/taxa with asterisk using ggtree
5.6 years ago Guangchuang Yu ★ 1.2k
1
vote
2
replies
4.1k
views
Answer: A: error in keytype performing "enrichGO" from clusterprofiler
5.8 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.2k
views
Answer: C: How to change the siez of lables in heatmap
5.9 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
4.3k
views
Answer: A: kegg enrichment using clusterProfiler could not read KEGG Orthology IDs
6.0 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
1.2k
views
Comment: C: MeSH enrichment analysis with "meshes"
6.0 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.2k
views
Comment: C: Gene similarity by GOSemSim
6.0 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
1.4k
views
Comment: C: how to get frequencies from plotDistToTSS
6.0 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.3k
views
Comment: C: Semantic similarity across entire MeSH tree in meshes pkg
6.0 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
4.0k
views
Comment: C: How to convert data frame obtained with enrichPathway back to an enrichPathway r
6.0 years ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
4.0k
views
Answer: A: How to convert data frame obtained with enrichPathway back to an enrichPathway r
6.0 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
2.8k
views
Comment: C: How can I read in BEAST nexus tree with treeio and get all node values
6.1 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.8k
views
Comment: C: How can I read in BEAST nexus tree with treeio and get all node values
6.1 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
1.4k
views
Answer: A: (GOSemSim package) secondary GO terms generating NA values
6.1 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
3.0k
views
Answer: A: Different results come from GO enrichment analysis with ENSEMBL ID and ENTREZID
6.1 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
5.2k
views
Comment: C: No gene set have size > 10 ...
6.2 years ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
5.2k
views
Comment: C: No gene set have size > 10 ...
6.2 years ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
1.8k
views
Answer: A: How to do functional enrichment analysis for only promoter regions using ChIPsee
6.3 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
4.9k
views
Answer: A: Understanding clusterprofiler enrichment results
6.4 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.0k
views
Comment: C: How to save changes on a phylogeneitc tree using ggtree and treeio?
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.6k
views
Comment: C: Error Installing Cluster Profiler
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.2k
views
Comment: C: How does vennplot() within Chipseeker define overlaps?
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.3k
views
Comment: C: GO similarity by GOSemSim
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
2.2k
views
Comment: C: ReactomePA / Reactome: Crash when plotting
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
2
replies
2.2k
views
Comment: C: ReactomePA / Reactome: Crash when plotting
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
1.6k
views
Comment: C: Remove highly similar terms from a GO gene set enrichment analysis
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
2.2k
views
Comment: C: ReactomePA / Reactome: Crash when plotting
6.5 years ago Guangchuang Yu ★ 1.2k
0
votes
2
replies
6.7k
views
Comment: C: clusterProfiler: exclude pathways and add gene names to cnetplot
6.6 years ago Guangchuang Yu ★ 1.2k
0
votes
1
reply
6.7k
views
Answer: A: clusterProfiler: exclude pathways and add gene names to cnetplot
6.6 years ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
2.6k
views
Comment: C: ReactomePA / Reactome: Extraction of genes within a term
6.6 years ago Guangchuang Yu ★ 1.2k
0
votes
0
replies
11k
views
Answer: A: Cannot install clusterProfiler
6.6 years ago Guangchuang Yu ★ 1.2k
1
vote
1
reply
2.6k
views
Answer: A: ReactomePA / Reactome: Extraction of genes within a term
6.6 years ago Guangchuang Yu ★ 1.2k
1
vote
0
replies
2.8k
views
Comment: C: Is there a way to set the ClusterProfiler color gradient?
6.6 years ago Guangchuang Yu ★ 1.2k
317 results • Page 1 of 7
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6