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Answer: A: How to arrive at an optimal value for attribute level in groupGO or enrichGO in
6.7 years ago Guangchuang Yu ★ 1.2k
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804
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Answer: A: Error in getGenomicAnnoStat(peak.gr) : object 'plab' not found
6.7 years ago Guangchuang Yu ★ 1.2k
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1
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2.4k
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Answer: A: p-values in Reactome and ReactomePA
6.8 years ago Guangchuang Yu ★ 1.2k
1
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0
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1.7k
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Answer: A: enrichGO (clusterProfiler) produces different results
6.8 years ago Guangchuang Yu ★ 1.2k
1
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1
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2.2k
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Answer: A: clusterProfiler for Zebrafish (Danio rerio)
6.8 years ago Guangchuang Yu ★ 1.2k
2
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1
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4.7k
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Answer: A: Clusterprofiler - MSigDB gene set analysis - Updated
6.8 years ago Guangchuang Yu ★ 1.2k
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1
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2.4k
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Comment: C: ReactomePA - Pathway analysis for DE porcine genes
6.8 years ago Guangchuang Yu ★ 1.2k
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2.4k
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Answer: A: ReactomePA - Pathway analysis for DE porcine genes
6.8 years ago Guangchuang Yu ★ 1.2k
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2.4k
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Comment: C: "input object should be a named list" error in ChIPseeker
6.8 years ago Guangchuang Yu ★ 1.2k
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1
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2.4k
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Answer: A: "input object should be a named list" error in ChIPseeker
6.8 years ago Guangchuang Yu ★ 1.2k
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0
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2.7k
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Comment: C: Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not
6.8 years ago Guangchuang Yu ★ 1.2k
2
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1
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2.7k
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Answer: A: Error in .checkKeys(value, Lkeys(x), x@ifnotfound) : value for "GO:0000059" not
6.9 years ago Guangchuang Yu ★ 1.2k
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0
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1.9k
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Answer: A: tip_glom and annotations?
6.9 years ago Guangchuang Yu ★ 1.2k
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1
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2.0k
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Answer: A: merging gseaResult objects
6.9 years ago Guangchuang Yu ★ 1.2k
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1
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1.8k
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Answer: A: Reference for edge and node properties suitable for enrichMap{DOSE}
6.9 years ago Guangchuang Yu ★ 1.2k
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1
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3.2k
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Comment: C: ChIPseeker question: provide custom csAnno to plots
6.9 years ago Guangchuang Yu ★ 1.2k
0
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1
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3.2k
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Comment: C: ChIPseeker question: provide custom csAnno to plots
6.9 years ago Guangchuang Yu ★ 1.2k
0
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1
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3.2k
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Comment: C: ChIPseeker question: provide custom csAnno to plots
6.9 years ago Guangchuang Yu ★ 1.2k
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0
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3.0k
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Answer: A: custom annotation in annotatePeak
7.0 years ago Guangchuang Yu ★ 1.2k
1
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0
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2.6k
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Comment: C: ChIPSeeker enrichPeakOverlap external dataset downloads
7.0 years ago Guangchuang Yu ★ 1.2k
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1
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2.2k
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Answer: A: enrichGO returning NA
7.0 years ago Guangchuang Yu ★ 1.2k
1
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1
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2.6k
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Comment: C: ChIPSeeker enrichPeakOverlap external dataset downloads
7.0 years ago Guangchuang Yu ★ 1.2k
0
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1
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5.6k
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Answer: A: failing to install the package clusterProfiler in R (version 3.4.1)
7.0 years ago Guangchuang Yu ★ 1.2k
1
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1
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2.6k
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Comment: C: ChIPSeeker enrichPeakOverlap external dataset downloads
7.0 years ago Guangchuang Yu ★ 1.2k
2
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1
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2.6k
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Answer: A: ChIPSeeker enrichPeakOverlap external dataset downloads
7.0 years ago Guangchuang Yu ★ 1.2k
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2
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2.2k
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Answer: A: enrichGO returning NA
7.0 years ago Guangchuang Yu ★ 1.2k
3
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2
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4.4k
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Answer: A: Function simplify fails when argument ont is set to "ALL" in enrichGO function i
7.0 years ago Guangchuang Yu ★ 1.2k
0
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1
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2.9k
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Comment: C: clusterProfiler compareCluster enrichDAVID
7.1 years ago Guangchuang Yu ★ 1.2k
0
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0
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2.6k
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Answer: A: how to define the downstream range in ChIPseeker
7.1 years ago Guangchuang Yu ★ 1.2k
1
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1
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4.0k
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Answer: A: enrichGO from DOSE, clusterprofiler is returning empty result.
7.1 years ago Guangchuang Yu ★ 1.2k
2
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1
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6.0k
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Answer: A: Pathway analysis using ReactomePA::enrichPathway(): doubts about minGSSize and m
7.1 years ago Guangchuang Yu ★ 1.2k
1
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1
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3.1k
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Answer: A: ChIPseeker peak annotation tssRegion
7.1 years ago Guangchuang Yu ★ 1.2k
0
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0
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1.5k
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Answer: A: clusterprofiler enrichment analysis geneList argument: duplicate 'row.names' (en
7.1 years ago Guangchuang Yu ★ 1.2k
0
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0
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8.1k
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Answer: A: question on GO analysis using clusterProfiler
7.1 years ago Guangchuang Yu ★ 1.2k
3
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0
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1.5k
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Answer: A: chipseeker annotation of focused genic regions
7.1 years ago Guangchuang Yu ★ 1.2k
2
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0
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6.8k
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Answer: A: clusterProfiler - Non model organism
7.2 years ago Guangchuang Yu ★ 1.2k
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1
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2.3k
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Comment: C: significance of ChIPseq peak overlap
7.2 years ago Guangchuang Yu ★ 1.2k
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1
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1.7k
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Comment: C: GO analysis under-represented genes and over-represented (enrichment) down-regul
7.2 years ago Guangchuang Yu ★ 1.2k
1
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0
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1.4k
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Comment: C: clusterProfiler enrichGO under-represented term
7.2 years ago Guangchuang Yu ★ 1.2k
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0
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2.1k
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Answer: A: ggtree: time-scaled tree s
7.3 years ago Guangchuang Yu ★ 1.2k
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1
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4.1k
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Answer: A: clusterProfiler: different runs return different results for gse functions
7.3 years ago Guangchuang Yu ★ 1.2k
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0
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3.5k
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Comment: C: clusterProfiler - interpretation of enrichMap
7.4 years ago Guangchuang Yu ★ 1.2k
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2
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3.7k
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Answer: A: gseDO function input
7.4 years ago Guangchuang Yu ★ 1.2k
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0
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2.9k
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Comment: C: eroor mssage using gseKEGG
7.4 years ago Guangchuang Yu ★ 1.2k
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0
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3.5k
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Comment: C: #clusterProfiler# KEGG enrichment with non-reference species
7.4 years ago Guangchuang Yu ★ 1.2k
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0
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3.2k
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Answer: A: ClusterProfiler dotplot formatting
7.5 years ago Guangchuang Yu ★ 1.2k
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0
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5.0k
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Comment: C: odd results "No enrichment found in any of gene cluster"
7.5 years ago Guangchuang Yu ★ 1.2k
0
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1
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5.0k
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Comment: C: odd results "No enrichment found in any of gene cluster"
7.5 years ago Guangchuang Yu ★ 1.2k
0
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1
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5.0k
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Answer: A: odd results "No enrichment found in any of gene cluster"
7.5 years ago Guangchuang Yu ★ 1.2k
0
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0
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1.7k
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Answer: A: Chip-seq peak annotation [Chipseeker]
7.5 years ago Guangchuang Yu ★ 1.2k
317 results • Page 2 of 7
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