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Comment: Comment: Using DiffBind blacklists and greylists with results mapped to BDGP6
3.9 years ago Gord Brown ▴ 670
1
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0
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857
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Answer: Answer: What is the correct interpretation of the p-value in GreyListChIP?
3.9 years ago Gord Brown ▴ 670
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2.2k
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Answer: Answer: Learning DiffBind - some basic questions
4.0 years ago Gord Brown ▴ 670
2
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1
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2.2k
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Answer: Answer: Learning DiffBind - some basic questions
4.0 years ago Gord Brown ▴ 670
0
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1
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2.1k
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Comment: C: Diffbind: Using bigwig tracks in place of bam files
5.7 years ago Gord Brown ▴ 670
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1
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2.1k
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Answer: A: Diffbind: Using bigwig tracks in place of bam files
5.7 years ago Gord Brown ▴ 670
1
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0
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9.5k
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Comment: C: Warning in "countReads" [Warning message: In .Seqinfo.mergexy(x, y) : The 2 comb
5.9 years ago Gord Brown ▴ 670
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1.5k
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Comment: C: two factor chip with diffbind and edgeR (or DESeq2).
6.8 years ago Gord Brown ▴ 670
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0
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2.3k
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Comment: C: DiffBind error with dba.count after update
7.0 years ago Gord Brown ▴ 670
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0
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2.6k
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Comment: C: Using HOMER called peaks in DiffBind
7.0 years ago Gord Brown ▴ 670
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0
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1.4k
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Comment: C: Inconsistent peak width with DiffBind "summit" function
7.0 years ago Gord Brown ▴ 670
3
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5.2k
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Answer: A: Analyzing data without replicates using DiffBind
7.0 years ago Gord Brown ▴ 670
2
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0
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5.2k
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Answer: A: Analyzing data without replicates using DiffBind
7.0 years ago Gord Brown ▴ 670
1
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1
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2.3k
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Answer: A: DiffBind error with dba.count after update
7.1 years ago Gord Brown ▴ 670
3
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0
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3.1k
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Answer: A: Error When using dba.count() in DiffBind
7.1 years ago Gord Brown ▴ 670
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1
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3.1k
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Comment: C: Error When using dba.count() in DiffBind
7.1 years ago Gord Brown ▴ 670
0
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0
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2.3k
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Comment: C: DiffBind error with dba.count after update
7.1 years ago Gord Brown ▴ 670
0
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1
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3.1k
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Comment: C: Error When using dba.count() in DiffBind
7.1 years ago Gord Brown ▴ 670
0
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1
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3.1k
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Comment: C: Error When using dba.count() in DiffBind
7.1 years ago Gord Brown ▴ 670
0
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2
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3.1k
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Answer: A: Error When using dba.count() in DiffBind
7.1 years ago Gord Brown ▴ 670
0
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0
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1.2k
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Answer: A: Error with dba.count function code
7.1 years ago Gord Brown ▴ 670
0
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0
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7.7k
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Comment: C: Diffbind: edgeR or DESeq2 ?
7.1 years ago Gord Brown ▴ 670
0
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1
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1.7k
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Answer: A: Error with dba.count function
7.1 years ago Gord Brown ▴ 670
0
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0
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2.3k
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Comment: C: DiffBind consensus peak help
7.2 years ago Gord Brown ▴ 670
0
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1
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2.3k
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Comment: C: DiffBind consensus peak help
7.2 years ago Gord Brown ▴ 670
1
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1
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2.3k
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Comment: C: DiffBind consensus peak help
7.2 years ago Gord Brown ▴ 670
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0
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2.0k
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Answer: A: How to set the parameter "fragmentSize" in DiffBind and set parameter for paired
7.3 years ago Gord Brown ▴ 670
1
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1
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1.6k
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Answer: A: How to use Diffbind as complete beginner?
7.4 years ago Gord Brown ▴ 670
0
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1
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2.3k
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Answer: A: DiffBind: failed to run dba.count in SSH
7.6 years ago Gord Brown ▴ 670
0
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1
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2.3k
views
Comment: C: DiffBind: failed to run dba.count in SSH
7.6 years ago Gord Brown ▴ 670
2
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0
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1.9k
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Answer: A: RStudio quits unexpectedly while running DiffBind on R 3.4.0
7.6 years ago Gord Brown ▴ 670
0
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1
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2.3k
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Comment: C: DiffBind: failed to run dba.count in SSH
7.6 years ago Gord Brown ▴ 670
0
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1
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1.9k
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Comment: C: RStudio quits unexpectedly while running DiffBind on R 3.4.0
7.6 years ago Gord Brown ▴ 670
0
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1
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2.6k
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Comment: C: Path to file in windows
7.6 years ago Gord Brown ▴ 670
0
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1
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1.9k
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Comment: C: RStudio quits unexpectedly while running DiffBind on R 3.4.0
7.6 years ago Gord Brown ▴ 670
0
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1
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2.6k
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Comment: A: Path to file in windows
7.6 years ago Gord Brown ▴ 670
2
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1
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1.1k
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Answer: A: Diffbind data extraction after DE analysis
7.6 years ago Gord Brown ▴ 670
0
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1
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2.6k
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Comment: C: Path to file in windows
7.6 years ago Gord Brown ▴ 670
0
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1
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2.6k
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Comment: C: Path to file in windows
7.6 years ago Gord Brown ▴ 670
0
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1
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2.6k
views
Comment: C: Path to file in windows
7.6 years ago Gord Brown ▴ 670
0
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1
reply
2.6k
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Comment: C: Path to file in windows
7.6 years ago Gord Brown ▴ 670
0
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0
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1.7k
views
Answer: A: Subsampling bam file - error DiffBind
7.6 years ago Gord Brown ▴ 670
1
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1
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1.7k
views
Comment: C: Subsampling bam file - error DiffBind
7.6 years ago Gord Brown ▴ 670
1
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0
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1.7k
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Comment: C: DiffBind: How could I debug estimateDispersionsFit (required by DBA_DESEQ2)
7.6 years ago Gord Brown ▴ 670
0
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0
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1.1k
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Answer: A: DiffBind absence of reads
7.6 years ago Gord Brown ▴ 670
0
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0
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2.5k
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Comment: C: DiffBind for open chromatin mapping
7.9 years ago Gord Brown ▴ 670
0
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0
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927
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Answer: A: DiffBind q value analysis
7.9 years ago Gord Brown ▴ 670
0
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0
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1.2k
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Answer: A: DiffBind PE data
7.9 years ago Gord Brown ▴ 670
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2
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2.5k
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Comment: C: DiffBind for open chromatin mapping
7.9 years ago Gord Brown ▴ 670
1
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1
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1.3k
views
Answer: A: How can I set custom colors in DiffBind using dba.plotHeatmap
8.0 years ago Gord Brown ▴ 670
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